LOCUS SIU00467.1 941 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 Probable glycine dehydrogenase gcvB (Glycine decarboxylase) (Glycine cleavage system P-protein) protein. ACCESSION LT708304-1880 PROTEIN_ID SIU00467.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="gcvB" /locus_tag="BQ2027_MB1863" /note="Mb1863, gcvB, len: 941 aa. Equivalent to Rv1832, len: 941 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 941 aa overlap). Probable gcvB, glycine dehydrogenase [decarboxylating] (EC 1.4.4.2), highly similar to GCSP_ECOLI|P33195 glycine dehydrogenase (decarboxylating) from Escherichia coli (957 aa), FASTA scores: opt: 2194, E(): 0, (55.4% identity in 961 aa overlap). THE GLYCINE CLEAVAGE SYSTEM IS COMPOSED OF FOUR PROTEINS: P, T, L, AND H. Protein product from Mb1863 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb1863 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:Q7VET8" /db_xref="InterPro:IPR003437" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="InterPro:IPR020581" /db_xref="UniProtKB/Swiss-Prot:Q7VET8" BEGIN 1 MSDHSTFADR HIGLDSQAVA TMLAVIGVDS LDDLAVKAVP AGILDTLTDT GAAPGLDSLP 61 PAASEAEALA ELRALADANT VAVSMIGQGY YDTHTPPVLL RNIIENPAWY TAYTPYQPEI 121 SQGRLEALLN FQTLVTDLTG LEIANASMLD EGTAAAEAMT LMHRAARGPV KRVVVDADVF 181 TQTAAVLATR AKPLGIEIVT ADLRAGLPDG EFFGAIAQLP GASGRITDWS ALVQQAHDRG 241 ALVAVGADLL ALTLIAPPGE IGADVAFGTT QRFGVPMGFG GPHAGYLAVH AKHARQLPGR 301 LVGVSVDSDG TPAYRLALQT REQHIRRDKA TSNICTAQVL LAVLAAMYAS YHGAGGLTAI 361 ARRVHAHAEA IAGALGDALV HDKYFDTVLA RVPGRADEVL ARAKANGINL WRVDADHVSV 421 ACDEATTDTH VAVVLDAFGV AAAAPAHADI ATRTSEFLTH PAFTQYRTET SMMRYLRALA 481 DKDIALDRSM IPLGSCTMKL NAAAEMESIT WPEFGRQHPF APASDTAGLR QLVADLQSWL 541 VLITGYDAVS LQPNAGSQGE YAGLLAIHEY HASRGEPHRD ICLIPSSAHG TNAASAALAG 601 MRVVVVDCHD NGDVDLDDLR AKVGEHAERL SALMITYPST HGVYEHDIAE ICAAVHDAGG 661 QVYVDGANLN ALVGLARPGK FGGDVSHLNL HKTFCIPHGG GGPGVGPVAV RAHLAPFLPG 721 HPFAPELPKG YPVSSAPYGS ASILPITWAY IRMMGAEGLR AASLTAITSA NYIARRLDEY 781 YPVLYTGENG MVAHECILDL RGITKLTGIT VDDVAKRLAD YGFHAPTMSF PVAGTLMVEP 841 TESESLAEVD AFCEAMIGIR AEIDKVGAGE WPVDDNPLRG APHTAQCLLA SDWDHPYTRE 901 QAAYPLGTAF RPKVWPAVRR IDGAYGDRNL VCSCPPVEAF A //