LOCUS       SIU00462.1               162 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 Glycogen
            accumulation regulator GarA protein.
ACCESSION   LT708304-1875
PROTEIN_ID  SIU00462.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="garA"
                     /locus_tag="BQ2027_MB1858"
                     /note="Mb1858, cfp17, len: 162 aa. Equivalent to Rv1827,
                     len: 162 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 162 aa overlap). cfp17, conserved
                     hypothetical protein (see citation below), equivalent to
                     O32919|MLCB1788.36c hypothetical protein from
                     Mycobacterium leprae (162 aa), FASTA scores: opt: 888,
                     E(): 0, (87.0% identity in 161 aa overlap). Protein
                     product from Mb1858 detected using shotgun mass
                     spectrometry and SWATH mass spectrometry. Mb1858 found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing."
                     /db_xref="InterPro:IPR000253"
                     /db_xref="InterPro:IPR008984"
                     /db_xref="PDB:2KKL"
                     /db_xref="UniProtKB/Swiss-Prot:P64898"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MTDMNPDIEK DQTSDEVTVE TTSVFRADFL SELDAPAQAG TESAVSGVEG LPPGSALLVV
       61 KRGPNAGSRF LLDQAITSAG RHPDSDIFLD DVTVSRRHAE FRLENNEFNV VDVGSLNGTY
      121 VNREPVDSAV LANGDEVQIG KFRLVFLTGP KQGEDDGSTG GP
//