LOCUS SIU00379.1 865 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE CONSERVED TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER protein. ACCESSION LT708304-1792 PROTEIN_ID SIU00379.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB1776" /note="Mb1776, -, len: 865 aa. Equivalent to Rv1747, len: 865 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 865 aa overlap). Probable conserved transmembrane ATP-binding protein ABC transporter (see citation below), similar to others e.g Q55956 ABC transporter from Synechocystis sp. (790 aa), FASTA scores: opt: 738, E(): 6.3e-26, (31.6% identity in 632 aa overlap); etc. Also similar to other Mycobacterium tuberculosis ABC-type transporters e.g. Rv2397c|MTCY253.24, FASTA score: (35.2% identity in 213 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop), and PS00211 ABC transporters family signature. BELONGS TO THE ATP-BINDING TRANSPORT PROTEIN FAMILY (ABC TRANSPORTERS). Protein product from Mb1776 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb1776 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3XZ83" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR013525" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A0A1R3XZ83" BEGIN 1 MPMSQPAAPP VLTVRYEGSE RTFAAGHDVV VGRDLRADVR VAHPLISRAH LLLRFDQGRW 61 VAIDNGSLNG LYLNNRRVPV VDIYDAQRVH IGNPDGPALD FEVGRHRGSA GRPPQTTSIR 121 LPNLSAGAWP TDGPPQTGTL GSGQLQQLPP ATTRIPAAPP SGPQPRYPTG GQQLWPPSGP 181 QRAPQIYRPP TAAPPPAGAR GGTEAGNLAT SMMKILRPGR LTGELPPGAV RIGRANDNDI 241 VIPEVLASRH HATLVPTPGG TEIRDNRSIN GTFVNGARVD AALLHDGDVV TIGNIDLVFA 301 DGTLARREEN LLETRVGGLD VRGVTWTIDG DKTLLDGISL TARPGMLTAV IGPSGAGKST 361 LARLVAGYTH PTDGTVTFEG HNVHAEYASL RSRIGMVPQD DVVHGQLTVK HALMYAAELR 421 LPPDTTKDDR TQVVARVLEE LEMSKHIDTR VDKLSGGQRK RASVALELLT GPSLLILDEP 481 TSGLDPALDR QVMTMLRQLA DAGRVVLVVT HSLTYLDVCD QVLLLAPGGK TAFCGPPTQI 541 GPVMGTTNWA DIFSTVADDP DAAKARYLAR TGPTPPPPPV EQPAELGDPA HTSLFRQFST 601 IARRQLRLIV SDRGYFVFLA LLPFIMGALS MSVPGDVGFG FPNPMGDAPN EPGQILVLLN 661 VGAVFMGTAL TIRDLIGERA IFRREQAVGL STTAYLIAKV CVYTVLAVVQ SAIVTVIVLV 721 GKGGPTQGAV ALSKPDLELF VDVAVTCVAS AMLGLALSAI AKSNEQIMPL LVVAVMSQLV 781 FSGGMIPVTG RVPLDQMSWV TPARWGFAAS AATVDLIKLV PGPLTPKDSH WHHTASAWWF 841 DMAMLVALSV IYVGFVRWKI RLKAC //