LOCUS SIU00334.1 556 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE D-SERINE/ALANINE/GLYCINE TRANSPORTER PROTEIN CYCA protein. ACCESSION LT708304-1747 PROTEIN_ID SIU00334.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="cycA" /locus_tag="BQ2027_MB1730C" /note="Mb1730c, cycA, len: 556 aa. Equivalent to Rv1704c, len: 556 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 556 aa overlap). Probable cycA, D-serine/D-alanine/glycine transporter, highly similar to P39312|CYCA_ECOLI d-serine/d-alanine/glycine transporter from Escherichia coli (470 aa), FASTA scores: opt: 1906, E(): 0, (59.3% identity in 459 aa overlap); etc. Also similar to other Mycobacterium tuberculosis amino-acid permeases e.g. Rv2127, Rv0346c, etc. Contains PS00218 amino acid permeases signature. BELONGS TO THE AMINO ACID PERMEASE FAMILY (APC FAMILY). Protein product from Mb1730c detected using SWATH mass spectrometry. Mb1730c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3XZW7" /db_xref="InterPro:IPR002293" /db_xref="InterPro:IPR004840" /db_xref="InterPro:IPR004841" /db_xref="UniProtKB/TrEMBL:A0A1R3XZW7" BEGIN 1 MPDDIAAADP TDTQPHLRRD LANRHIQLIA IGGAIGTGLF MGSGRTISLA GPAVMVVYGI 61 IGFFVFFVLR AMGELLLSNL NYKSFVDFAA DLLGPAAGFF VGWSYWFAWV VTGIADLVAI 121 TGYARFWWPG LPIWVPALVT VALILAVNLF SVRHFGELEF WFALIKVAAI VCLIAVGAIL 181 VATNFVSPHG VHATIENLWN DNGFFPTGFL GVVSGFQIAF FAYIGVELVG TAAAETADPR 241 RTLPRAINAV PLRVAVFYIG ALLAILAVVP WRQFASGESP FVTMFSLAGL AAAASVVNFV 301 VVTAAASSAN SGFFSTGRML FGLADEGHAP AAFHQLNRGG VPAPALLLTA PLLLTSIPLL 361 YAGRSVIGAF TLVTTVSSLL FMFVWAMIII SYLVYRRRHP QRHTDSVYKM PGGVVMCWAV 421 LVFFAFVIWT LTTETETATA LAWFPLWFVL LAVGWLVTQR RQSRRSFGFH CQVVGVRQQL 481 GRGMARLAMK IHARPKLRSA VVVEPVSAGE PGARRSAKSV RKLASDDSQS AHCPVAVVGL 541 ADGGRDPQYH HDGPDR //