LOCUS       SIU00334.1               556 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            D-SERINE/ALANINE/GLYCINE TRANSPORTER PROTEIN CYCA protein.
ACCESSION   LT708304-1747
PROTEIN_ID  SIU00334.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="cycA"
                     /locus_tag="BQ2027_MB1730C"
                     /note="Mb1730c, cycA, len: 556 aa. Equivalent to Rv1704c,
                     len: 556 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.8% identity in 556 aa overlap). Probable cycA,
                     D-serine/D-alanine/glycine transporter, highly similar to
                     P39312|CYCA_ECOLI d-serine/d-alanine/glycine transporter
                     from Escherichia coli (470 aa), FASTA scores: opt: 1906,
                     E(): 0, (59.3% identity in 459 aa overlap); etc. Also
                     similar to other Mycobacterium tuberculosis amino-acid
                     permeases e.g. Rv2127, Rv0346c, etc. Contains PS00218
                     amino acid permeases signature. BELONGS TO THE AMINO ACID
                     PERMEASE FAMILY (APC FAMILY). Protein product from Mb1730c
                     detected using SWATH mass spectrometry. Mb1730c found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing."
                     /db_xref="GOA:A0A1R3XZW7"
                     /db_xref="InterPro:IPR002293"
                     /db_xref="InterPro:IPR004840"
                     /db_xref="InterPro:IPR004841"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XZW7"
BEGIN
        1 MPDDIAAADP TDTQPHLRRD LANRHIQLIA IGGAIGTGLF MGSGRTISLA GPAVMVVYGI
       61 IGFFVFFVLR AMGELLLSNL NYKSFVDFAA DLLGPAAGFF VGWSYWFAWV VTGIADLVAI
      121 TGYARFWWPG LPIWVPALVT VALILAVNLF SVRHFGELEF WFALIKVAAI VCLIAVGAIL
      181 VATNFVSPHG VHATIENLWN DNGFFPTGFL GVVSGFQIAF FAYIGVELVG TAAAETADPR
      241 RTLPRAINAV PLRVAVFYIG ALLAILAVVP WRQFASGESP FVTMFSLAGL AAAASVVNFV
      301 VVTAAASSAN SGFFSTGRML FGLADEGHAP AAFHQLNRGG VPAPALLLTA PLLLTSIPLL
      361 YAGRSVIGAF TLVTTVSSLL FMFVWAMIII SYLVYRRRHP QRHTDSVYKM PGGVVMCWAV
      421 LVFFAFVIWT LTTETETATA LAWFPLWFVL LAVGWLVTQR RQSRRSFGFH CQVVGVRQQL
      481 GRGMARLAMK IHARPKLRSA VVVEPVSAGE PGARRSAKSV RKLASDDSQS AHCPVAVVGL
      541 ADGGRDPQYH HDGPDR
//