LOCUS SIU00088.1 1408 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs27 protein. ACCESSION LT708304-1501 PROTEIN_ID SIU00088.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS27" /locus_tag="BQ2027_MB1485C" /note="Mb1485c, PE_PGRS27, len: 1408 aa. Similar to Rv1450c, len: 1329 aa, from Mycobacterium tuberculosis strain H37Rv, (92.1% identity in 1417 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to Y03A_MYCTU|Q10637 hypothetical glycine-rich 49.6 kd protein (603 aa), fasta scores: opt: 2112, E(): 0, (56.5% identity in 630 aa overlap). REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, insertions of 27 bp, 207 bp and 27 bp, substitutions of 60 bp to 63 bp and 11 bp, and a 27 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (1408 aa versus 1329 aa)." /db_xref="InterPro:IPR000084" /db_xref="UniProtKB/TrEMBL:A0A1R3XYE8" BEGIN 1 MSLVIVAPET VAAAALDVAR IGSSIGVANS AAAGSTTSVL AAGADEVSAA IATLFGSHAR 61 EYQAISTQVA AFHDRFAQTL SAAVGSYVSA EATNAAPLAT LEHNVLNALN APTQALLGRP 121 LIGDGAAGAP GTGQAGGAGG ILWGNGGAGG SGAPGQVGGA GGAAGLFGTG GAGGAGGAGA 181 AGGAGGSGGW LLGNGGVGGA GGQSLLGGAT GGAGGNAGLF GVGGTGGPGG PGGPGGPGGP 241 GGPGGVGGTG GAGGLGGTLY GAGGHGGAGG PGPIGGVGGH GGVGGAAGLL GVGGHGGAGG 301 HGAAGIAGAA GKGGIFPDGS NGGAGGDAGD GGTGGRGGWL AGAGGAGGDG GIGGTGGAGG 361 AGFSRALIVA GDNGGDGGNG GMGGAGGAGG PGGAGGLISL LGGQGAGGDG GDGGAGGVGG 421 DRGAGANGNQ AVNAGAGGAG GHGGDPGAGG AGGTGGAGST IGAHGAAGAS PTSGGNGGAG 481 GNGAHFSSGG KAGGNGGAGG AGGLVGNGGA GGAGGNGAPG APPSGGDPNG GGGGAGGAGG 541 KGGDGGAQAG DGGAGGAGGK GGNGGNGATG ATGLNGLGAG ADGTDGGKGG NGGAGGGGGA 601 GGQGGKALAA THQDGSMGAG GAGGNGGAGG MGGDGGNGAK GTFDNGGDGV GGNGGNGGSR 661 GIGGAGGIGG AGSTAGADGA RGATPTSGGN GGTGGNGANA TVAGGAGGAG GKGGNGGLVG 721 NGGAGGKGGD GMAGVAGSSP TTAGESGTSG QNGGAGGAGG AGGRGGDFGG DGGTGGAGGN 781 GADGGAGGNG ANGANATTPG AKGGDGGHGG PGAQGGNGGQ GGPGGLAGNL FGQNGIQGVG 841 GSGGKGGAGG LAGDGGNGAN GNFAFGDGNG GHGGNGGNPG AGGQGGSGGA GSTPGAKGAH 901 GFTPTSGGDG GDGGNGGHSQ VVGGNGGDGG NGGNGGSAGT GGNGGRGGDG AFGGMSANAT 961 NPGENGPNGN PGGNGGAGGA GGAGLNGGNG GAGGNGGLGG FGGNGAAGAN GVAVGAPGQP 1021 GGAGGHGGAG GNGGAGGNGG QGVVSDGAGG AGGAGGDGGA PGDGANGGNG QGAGAFAGGG 1081 GGRGGDGGNA GNAGAGGPGG TGSTAGKAGP AGSILHDGGN GGHGGHGAAS GGNGGPGGHG 1141 GNGGNGGTGA NGGNGGIGGT GGAGSTGAKG VLGTNEGDGG DGGRGGNGGR GGNGGQGLTG 1201 AGGNGGTGGT PGNGGNGGNG ASGDLVTSPG DGGGGGRGGD AGRGGDAGLG GSSGPGGTPG 1261 DWGTGGTGGT GGTGGQGANG GLTGGRGGTG GNGGAGGTGG TGHNGSQPGM GGNGGAGGFG 1321 GNGFAGVGGR GGMGGSGGTG GTGDAGPFGT GTGGTGGHGG QGGGGGFSIL LGLGGLGGLG 1381 SPGSIATGTA GGAGGGGGFG GLGGGEFV //