LOCUS       SIT99860.1               177 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            TRANSMEMBRANE PROTEIN protein.
ACCESSION   LT708304-1272
PROTEIN_ID  SIT99860.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB1259C"
                     /note="Mb1259c, -, len: 177 aa. Equivalent to Rv1227c,
                     len: 177 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100% identity in 177 aa overlap). Possible transmembrane
                     protein, similar to P96615 hypothetical protein ydbS from
                     Bacillus subtilis (159 aa), fasta scores: E(): 3.6e-07,
                     (30.1% identity in 163 aa overlap). Protein product from
                     Mb1259c detected using SWATH mass spectrometry. Mb1259c
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3XXQ6"
                     /db_xref="InterPro:IPR005182"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XXQ6"
BEGIN
        1 MDHARNVPSA TGPQRNHLAL AEPAHRPSSQ APVMWALSAS LGWILPVIAQ LVWWAVHPQP
       61 PWPHLAAAAL TAVAMVVHIG VVPLWRYRVH RWEISPQAVF TRTGWLVQER RITPISRVQT
      121 VDTYRGPMDR LFGLANVTVT TASSAGAVHI EALDTDVADR VVAQLTDIAA LRGEDAT
//