LOCUS SIT99850.1 548 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER protein. ACCESSION LT708304-1262 PROTEIN_ID SIT99850.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB1249C" /note="Mb1249c, -, len: 548 aa. Equivalent to Rv1217c, len: 548 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 548 aa overlap). Probable tetronasin-transport integral membrane ABC transporter (see citation below), similar to many e.g. AL049754|SCH10_12 probable ABC-type transport system membrane-spanning protein from Streptomyces coelicolor (539 aa), FASTA scores: opt: 1309, E(): 0, (40.9% identity in 550 aa overlap); Q54407|X73633 TnrB3 protein from Streptomyces longisporoflavus (337 aa), FASTA scores: opt: 692, E(): 0, (39.5% identity in 324 aa overlap); etc. Also has regions similar to Mycobacterium leprae proteins Q49964|U1756Q (109 aa), FASTA scores: opt: 431, E(): 3.1e-20, (64.8% identity in 105 aa overlap) and Q49965|U1756R (82 aa), FASTA scores: opt:154, E(): 0.0028, (61.0% identity in 41 aa overlap). Protein product from Mb1249c detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb1249c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3XXP2" /db_xref="UniProtKB/TrEMBL:A0A1R3XXP2" BEGIN 1 MSSTVIDRAR PAGHRAPHRG SGFTGTLGLL RLYLRRDRVS LPLWVLLLSV PLATVYIASV 61 ETVYPDRSAR AAAAAAIMAS PAQRALYGPV YNDSLGAVGI WKAGMFHTLI AVAVILTVIR 121 HTRADEESGR AELIDSTVVG RYTNLTGALL LSFGASIATG AIGALGLLAT DVAPAGSVAF 181 GVALAASGMV FTAVAAVAAQ LSPSARFTRA VAFAVLGTAF ALRAIGDAGS GTLSWCSPLG 241 WSLQVRPYAG ERWWVLLLSL ATAAVLTVLA YRLRAGRDVG AGLIAERPGA GTAGPMLSEP 301 FGLAWRLNRG SLLLWTVGLC LYGLVMGSVV HGIGDQLGDN TAVRDIVTRM GGTGALEQAF 361 LALAFTMIGM VAAAFAVSLT LRLHQEETGL RAETLLAGAV SRTHWLASHL AMALAGSAVA 421 TLISGVAAGL AYGMTVGDVG GKLPTVVGTA AVQLPAVWLL SAVTVGLFGL APRFTPVAWG 481 VLVGFIALYL LGSLAGFPQM LLNLEPFAHI PRVGGGDFTA VPLLWLLAID AALITLGAMA 541 FRRRDVRC //