LOCUS       SIT99850.1               548 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER
            protein.
ACCESSION   LT708304-1262
PROTEIN_ID  SIT99850.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB1249C"
                     /note="Mb1249c, -, len: 548 aa. Equivalent to Rv1217c,
                     len: 548 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.8% identity in 548 aa overlap). Probable
                     tetronasin-transport integral membrane ABC transporter
                     (see citation below), similar to many e.g.
                     AL049754|SCH10_12 probable ABC-type transport system
                     membrane-spanning protein from Streptomyces coelicolor
                     (539 aa), FASTA scores: opt: 1309, E(): 0, (40.9% identity
                     in 550 aa overlap); Q54407|X73633 TnrB3 protein from
                     Streptomyces longisporoflavus (337 aa), FASTA scores: opt:
                     692, E(): 0, (39.5% identity in 324 aa overlap); etc. Also
                     has regions similar to Mycobacterium leprae proteins
                     Q49964|U1756Q (109 aa), FASTA scores: opt: 431, E():
                     3.1e-20, (64.8% identity in 105 aa overlap) and
                     Q49965|U1756R (82 aa), FASTA scores: opt:154, E(): 0.0028,
                     (61.0% identity in 41 aa overlap). Protein product from
                     Mb1249c detected using shotgun mass spectrometry and SWATH
                     mass spectrometry. Mb1249c found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:A0A1R3XXP2"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XXP2"
BEGIN
        1 MSSTVIDRAR PAGHRAPHRG SGFTGTLGLL RLYLRRDRVS LPLWVLLLSV PLATVYIASV
       61 ETVYPDRSAR AAAAAAIMAS PAQRALYGPV YNDSLGAVGI WKAGMFHTLI AVAVILTVIR
      121 HTRADEESGR AELIDSTVVG RYTNLTGALL LSFGASIATG AIGALGLLAT DVAPAGSVAF
      181 GVALAASGMV FTAVAAVAAQ LSPSARFTRA VAFAVLGTAF ALRAIGDAGS GTLSWCSPLG
      241 WSLQVRPYAG ERWWVLLLSL ATAAVLTVLA YRLRAGRDVG AGLIAERPGA GTAGPMLSEP
      301 FGLAWRLNRG SLLLWTVGLC LYGLVMGSVV HGIGDQLGDN TAVRDIVTRM GGTGALEQAF
      361 LALAFTMIGM VAAAFAVSLT LRLHQEETGL RAETLLAGAV SRTHWLASHL AMALAGSAVA
      421 TLISGVAAGL AYGMTVGDVG GKLPTVVGTA AVQLPAVWLL SAVTVGLFGL APRFTPVAWG
      481 VLVGFIALYL LGSLAGFPQM LLNLEPFAHI PRVGGGDFTA VPLLWLLAID AALITLGAMA
      541 FRRRDVRC
//