LOCUS       SIT99781.1               160 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE
            TRANSPOSASE (FRAGMENT) protein.
ACCESSION   LT708304-1193
PROTEIN_ID  SIT99781.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB1181"
                     /note="Mb1181, -, len: 160 aa. Equivalent to Rv1150, len:
                     183 aa, from Mycobacterium tuberculosis strain H37Rv.
                     Possible fragment of transposase (pseudogene). Identical
                     to C-terminal part of S21394 transposase of putative
                     Mycobacterium tuberculosis IS element (308 aa), FASTA
                     scores: opt: 959, E(): 0, (99.3% identity in 145 aa
                     overlap). The transposase described here may be made by a
                     -1 frame shifting mechanism during translation that fuses
                     Rv1149|MTCI65.16 and Rv1150|MTCI65.17. No evidence found
                     to account for discrepancy with previously published
                     sequence. Second copy is Rv1041c|MTCY10G2.08. TBparse
                     score is 0.914. Mb1181 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:A0A1R3XX79"
                     /db_xref="InterPro:IPR002559"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XX79"
BEGIN
        1 MTTKIHALTD QREAPVRIRL TAGQAGDNPQ LLPLLDDYRH ASTEYALGST DFRLLADKAY
       61 SHPSTRAALR SKKIKHTIPE RQDQIDRRKA KGSAGGRPPA FDAALYGLRN TVERGFHRLK
      121 QWRGIATRYD KYALTYLGGV LLACAVIHAR VGTPKLGDTP
//