LOCUS SIT99721.1 850 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs22 protein. ACCESSION LT708304-1133 PROTEIN_ID SIT99721.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS22" /locus_tag="BQ2027_MB1121" /note="Mb1121, PE_PGRS22, len: 850 aa. Equivalent to Rv1091, len: 853 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 853 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins. Similar to Rv1087|AL021897|MTV017_39 Mycobacterium tuberculosis H37Rv (767 aa), FASTA scores: opt: 2819, E(): 0, (60.0% identity in 860 aa overlap). REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 9 bp deletion (ccggcggca-*) leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (850 aa versus 853 aa). Mb1121 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="InterPro:IPR000084" /db_xref="UniProtKB/TrEMBL:A0A1R3XXC0" BEGIN 1 MSFVIAAPEA LVAVASDLAG IGSALAEANA AALAPTTALL AAGADEVSAA IAALFGAHGQ 61 AYQTVSAQAS AFHAQFVQAL TGGGGAYAAA EAANVSAAQS TDQRLLDLIN GPTQALLGRP 121 LIGDGANGGP GQDGGPGGLL YGNGGNGGTS TTAGVAGGNG GAAGLIGNGG AGGGGGAGAA 181 GGNGGAGGWL YGNGGAGGAG GTSVIPGVAG GNGGAGGSAG LWGTGGAGGD GGNGRSGPVN 241 VAGSAGGNGG AGGAAGLFGD AGAGGNGGKG GAGGAAFSIN FTAGDGGAGG AGGSGGHALL 301 WGAGGAGGNG GSGGTGGAGG STAGAGGNGG AGGGGGTGGL LFGNGGAGGH GAAAGNGLAA 361 GNGVSSSGGG GAGGTGGAGG DGGAGGAGGN ARLWGVGGAG GAGGDGGAGG AGGKGGSGLS 421 GNANGGAGGD SGRGGTGGAG GEGGAAGLLV GTGGHGGDGG AGGAAVKGGD GGAAAGTGIA 481 GAGGRGGAGG SGGSGGDGGG GAAGPAGWLF GDGGAGGNGG AAAAGGAGGQ AGGGGGNGGN 541 GGNGGNGGNG GNGATGGWLY GNGGAGGQGA TAGAGGAGAN GVSSTNGGGN GGIGGTGGSG 601 GAGGNAGLLG VGGAGGHGAS GGAGDRGGAG GTGFISSDGG AGGDGGDGGN GGAGGTGGLL 661 FGAGGNGGPG GSGGAADIGG NGGAGNGGGT DGNGGNGGSG GGAGSGGDGG GAGGNGAWLF 721 GNGGAGGGGG KGGNGAGGGL GGGSFGLPGL NGSGGDGGDG GNGAPGGVLY GNGGAGGQGS 781 SGGIGGPGAT GGAGGKGGDG GDAQLIGDGG NGGNGGAGGT GGTPGPGGPG GSGGLGGLLF 841 GQTGTAGVSP //