LOCUS SIT99655.1 860 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE SENSOR PROTEIN KDPD protein. ACCESSION LT708304-1067 PROTEIN_ID SIT99655.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="kdpD" /locus_tag="BQ2027_MB1056C" /note="Mb1056c, kdpD, len: 860 aa. Equivalent to Rv1028c, len: 860 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 860 aa overlap). Probable kdpD, sensor protein (EC 2.7.3.-), similar to others e.g. KDPD_ECOLI|P21865 sensor protein from Escherichia coli strain K12 (894 aa), FASTA scores: opt: 1041, E(): 0, (32.3% identity in 888 aa overlap); etc. Contains PS00017 ATP/GTP-binding site motif A (P-loop). Protein product from Mb1056c detected using SWATH mass spectrometry. Mb1056c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3XXH9" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR003852" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR006016" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR025201" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036097" /db_xref="InterPro:IPR036890" /db_xref="InterPro:IPR038318" /db_xref="UniProtKB/TrEMBL:A0A1R3XXH9" BEGIN 1 MTLLFADLCA IFTPYRWMIE HVTTKRGQLR IYLGAAPGVG KTYAMLGEAH RRLERGTDVV 61 AAVVETHGRN KTAKLLEGIE MIPPRYVEYR GARFPELDVE AVLRRHPQVV LVDELAHTNT 121 PGSKNPKRWQ DVQEILDAGI TVISTVNIQH LEGLNDVVEQ ITGIEQKEKI PDEIVRAADQ 181 VELVDITPEA LRRRLAHGNV YAAERVDAAL SNYFRTGNLT ALREIALLWL ADQVDAALEK 241 YRADKKITAT WEARERVVVA VTGGPESETL VRRASRIASK SSAELMVVHV IRGDDLAGVS 301 APQLGRVREL ATSLGATMHT VVGDDVPTAL LDFAREMNAT QLVVGTSRRS RWARLFDEGI 361 GARTVQESGG IDVHMVTHPA ASRASGWSRV SPRERHIASW LAALVVPSVI CAITVAWLDR 421 FMGIGGESAL FFIGVLIVAL LGGVAPAALS ALLSGMLLNY FLTEPRYTWT IAEPDAAVTE 481 FVLLAMAVAV AVLVDGAASR TREARRASQE AELLALFAGS VLRGADLATL LQRVRETYSQ 541 RAVTMLRVRQ GASTGETVAC VGTNPCRDVD SADTAIEVGD DEFWMLMAGR KLAARDRRVL 601 TAVATQAAGL VKQRELAEEA GQAEAIARAD ELRRSLLSAV SHDLRTPLAA AKVAVSSLRT 661 EDVAFSPEDT AELLATIEES IDQLTALVAN LLDSSRLAAG VIRPQLRRAY LEEAVQRALV 721 SIGKGATGFY RSGIDRVKVD VGDAVAMADA GLLERVLANL IDNALRYAPD CVVRVNAGRV 781 RERVLINVID EGPGVPRGTE EQLFAPFQRP GDHDNTTGVG LGMSVARGFV EAMGGTISAT 841 DTPGGGLTVV IDLAAPEDRP //