LOCUS       SIT99542.1               439 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 probable
            transposase protein.
ACCESSION   LT708304-954
PROTEIN_ID  SIT99542.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0944C"
                     /note="Mb0944c, -, len: 439 aa. Equivalent to Rv0920c,
                     len: 439 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.8% identity in 439 aa overlap). Probable transposase
                     for IS1554, highly similar to others e.g.
                     MTCY441.35|Q45111 transposase from Mycobacterium
                     tuberculosis (419 aa), FASTA scores: opt: 1113, E(): 0,
                     (43.9% identity in 378 aa overlap); etc. Contains
                     transposases mutator family signature (PS01007). Mb0944c
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3XYX4"
                     /db_xref="InterPro:IPR001207"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XYX4"
BEGIN
        1 MDAAQVIEPA HAGQDVDEAA VAARELSGAE RALVGDLVRQ ARAEGVALTG PDGLLKALTK
       61 TVLEAALQEE MTEHLGYDRH AAAGRGSGNS RNGSRNKKVI TDACGQVEIA VPRDRNGTFE
      121 PVIVGKRKRR VTDVDRVVLS LYAKGLTTGE IAAHFADVYG VSVSKDTISR ITDRVIEEMQ
      181 AWWSRPLEKV YAAVFIDAIM VKIRDGQVRN RPVYAAIGVD LDGHKDILGM WAGEGDGESA
      241 KFWLAVLTEL RNRGVKDIFF LVCDGLKGLP DSVSAAFPLA TVQTCIIHLI RNTFRYASRK
      301 YWDKISVDLK PIYTAASAAE ARLRYEEFAE KWGKPYPAIT RLWDSAWEEF IPFLDYDVEI
      361 RRVPCSTNAI ESLNARYRRA VRARGHFPNE QSALKTLYLV TRSLDPKGTG QTKWAVRWKP
      421 ALNALAITFA DRMPAAEER
//