LOCUS       SIT99455.1               773 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 pe-
            pgrs family protein pe_pgrs13 protein.
ACCESSION   LT708304-867
PROTEIN_ID  SIT99455.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PE_PGRS13"
                     /locus_tag="BQ2027_MB0856"
                     /note="Mb0856, PE_PGRS13, len: 773 aa. Equivalent to
                     Rv0833, len: 749 aa, from Mycobacterium tuberculosis
                     strain H37Rv, (). Member of the Mycobacterium tuberculosis
                     PE family, PGRS subfamily of gly-rich proteins, but
                     lacking N-terminal domain (present in preceding ORF),
                     possibly due to frameshift. Similar in part to many others
                     e.g. MTCY28_25|Z95890 (914 aa), FASTA scores: opt: 2726,
                     E(): 0, (60.1% identity in 773 aa overlap); etc.
                     REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a
                     84 bp insertion leads to a longer product compared to its
                     homolog in Mycobacterium tuberculosis strain H37Rv (773 aa
                     versus 749 aa). Mb0856 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XWY6"
BEGIN
        1 MIGNGGAGGS GAPGAIGGAG GPAGLIGVGG AGGAGGDSAV AGVIGGAGGA GGAALLFGAG
       61 GAGGAGGSGG SGAAGGAGGA GGAGGLFASG GSGGFGGFAS TGTGGAGGTG GAGGLFASGG
      121 VGGTGGGAGS GGTGGVGGTG GAGGLFASGG AGGAGGSGGT GGAGGTGGAG GLFGAGGAGG
      181 LGGQGNHTGG HGGAGGSAGL LALGDGGAGG AGGAATTGTG GAGGAGGKAG LLFGSGGAGG
      241 SGGAAGTFGD TGNSGGAGGA GGKAGLLFGS GGAGGSGGAG GFANGSTGGA GGAGGGAGLI
      301 GNGGNGGSGG TSVATGGAGN GGAGGAGGGA GLIGNGGNGG SGGMGDAPGG TGVGGIGGLL
      361 LGLDGANAPA STNPLHTAQQ QALAAVNAPI QAVTGRPLIG NGANGAPGSG APGGHGGWLF
      421 GGGGTGGSGV SGGAGGDGGA GGILFGAGGA GGAGGAVTGT GATGGSGGAG GGALLFGAGG
      481 AGGAGGSSGI GGFAAGGAGG PGGAGGLFNG GGAGGAGGSG VSGGAGGEGG AGGAGGLFAG
      541 GGIGGAGGFG GFRGGEGGAG GAGGLFAGGG AGGAGGSGNN VGGAGGAGGV GGLFGAGGAG
      601 GSGGGGSVAG DGGAGGNAGL LAPGLAGGAG GGGGQGFDTG GAGGPGGDAG LLVGSGGVGG
      661 AGGFGLTTGG PGAAGGDAGL LFGSGGAGGA GGSGRTDLGG AGGAGGKAGL IGNGGNGGAG
      721 GAGGAGGPGG AAFGLGNGGN GGNGGTGTSA GSPGAGGAGG SLIGAEGLPG LLP
//