LOCUS SIT99455.1 773 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs13 protein. ACCESSION LT708304-867 PROTEIN_ID SIT99455.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS13" /locus_tag="BQ2027_MB0856" /note="Mb0856, PE_PGRS13, len: 773 aa. Equivalent to Rv0833, len: 749 aa, from Mycobacterium tuberculosis strain H37Rv, (). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, but lacking N-terminal domain (present in preceding ORF), possibly due to frameshift. Similar in part to many others e.g. MTCY28_25|Z95890 (914 aa), FASTA scores: opt: 2726, E(): 0, (60.1% identity in 773 aa overlap); etc. REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 84 bp insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (773 aa versus 749 aa). Mb0856 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="UniProtKB/TrEMBL:A0A1R3XWY6" BEGIN 1 MIGNGGAGGS GAPGAIGGAG GPAGLIGVGG AGGAGGDSAV AGVIGGAGGA GGAALLFGAG 61 GAGGAGGSGG SGAAGGAGGA GGAGGLFASG GSGGFGGFAS TGTGGAGGTG GAGGLFASGG 121 VGGTGGGAGS GGTGGVGGTG GAGGLFASGG AGGAGGSGGT GGAGGTGGAG GLFGAGGAGG 181 LGGQGNHTGG HGGAGGSAGL LALGDGGAGG AGGAATTGTG GAGGAGGKAG LLFGSGGAGG 241 SGGAAGTFGD TGNSGGAGGA GGKAGLLFGS GGAGGSGGAG GFANGSTGGA GGAGGGAGLI 301 GNGGNGGSGG TSVATGGAGN GGAGGAGGGA GLIGNGGNGG SGGMGDAPGG TGVGGIGGLL 361 LGLDGANAPA STNPLHTAQQ QALAAVNAPI QAVTGRPLIG NGANGAPGSG APGGHGGWLF 421 GGGGTGGSGV SGGAGGDGGA GGILFGAGGA GGAGGAVTGT GATGGSGGAG GGALLFGAGG 481 AGGAGGSSGI GGFAAGGAGG PGGAGGLFNG GGAGGAGGSG VSGGAGGEGG AGGAGGLFAG 541 GGIGGAGGFG GFRGGEGGAG GAGGLFAGGG AGGAGGSGNN VGGAGGAGGV GGLFGAGGAG 601 GSGGGGSVAG DGGAGGNAGL LAPGLAGGAG GGGGQGFDTG GAGGPGGDAG LLVGSGGVGG 661 AGGFGLTTGG PGAAGGDAGL LFGSGGAGGA GGSGRTDLGG AGGAGGKAGL IGNGGNGGAG 721 GAGGAGGPGG AAFGLGNGGN GGNGGTGTSA GSPGAGGAGG SLIGAEGLPG LLP //