LOCUS       SIT99339.1               179 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 50s
            ribosomal protein l6 rplf protein.
ACCESSION   LT708304-751
PROTEIN_ID  SIT99339.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="rplF"
                     /locus_tag="BQ2027_MB0740"
                     /note="Mb0740, rplF, len: 179 aa. Equivalent to Rv0719,
                     len: 179 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 179 aa overlap). Probable rplF, 50S
                     ribosomal protein L6, equivalent to O32998|MLCB2492_19 50S
                     RIBOSOMAL PROTEIN L6 from Mycobacterium leprae (179 aa).
                     Also highly similar to others e.g.
                     P46786|RL6_STRCO|CAB82085.1|AL161803|SCD31.42 50S
                     ribosomal protein L6 from Streptomyces coelicolor (179
                     aa), FASTA scores: opt: 872, E(): 0, (70.4% identity in
                     179 aa overlap); etc. Contains PS00525 Ribosomal protein
                     L6 signature 1. BELONGS TO THE L6P FAMILY OF RIBOSOMAL
                     PROTEINS. Protein product from Mb0740 detected using
                     shotgun mass spectrometry. Mb0740 found to be expressed
                     during exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:P66312"
                     /db_xref="InterPro:IPR000702"
                     /db_xref="InterPro:IPR002358"
                     /db_xref="InterPro:IPR019906"
                     /db_xref="InterPro:IPR020040"
                     /db_xref="InterPro:IPR036789"
                     /db_xref="UniProtKB/Swiss-Prot:P66312"
BEGIN
        1 MSRIGKQPIP VPAGVDVTIE GQSISVKGPK GTLGLTVAEP IKVARNDDGA IVVTRPDDER
       61 RNRSLHGLSR TLVSNLVTGV TQGYTTKMEI FGVGYRVQLK GSNLEFALGY SHPVVIEAPE
      121 GITFAVQAPT KFTVSGIDKQ KVGQIAANIR RLRRPDPYKG KGVRYEGEQI RRKVGKTGK
//