LOCUS       SIT99245.1               897 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            EXONUCLEASE V (BETA CHAIN) RECBA [FIRST PART] (EXODEOXYRIBONUCLEASE 
            V BETA CHAIN)(EXODEOXYRIBONUCLEASE V POLYPEPTIDE) protein.
ACCESSION   LT708304-657
PROTEIN_ID  SIT99245.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="recBa"
                     /locus_tag="BQ2027_MB0647C"
                     /note="Mb0647c, recBa, len: 897 aa. Equivalent to 5' end
                     of Rv0630c, len: 1094 aa, from Mycobacterium tuberculosis
                     strain H37Rv, (99.2% identity in 868 aa overlap). Probable
                     recB, exonuclease V, beta chain (exodeoxyribonuclease V,
                     beta chain) (EC 3.1.11.5), highly similar to other
                     exonucleases e.g. AF157643_2|recB|AAD46808.1 Escherichia
                     coli RecB protein homolog from Mycobacterium smegmatis
                     (1083 aa); P08394|EX5B_ECOLI|RORA|B2820
                     exodeoxyribonuclease v 135 kd polypeptide (EC 3.1.11.5)
                     (EXONUCLEASE V BETA CHAIN) from Escherichia coli strain
                     K12 (1180 aa), FASTA scores: opt: 289, E(): 4.3e-11, (29.5
                     identity in 1059 aa overlap); etc. Contains PS00017
                     ATP/GTP-binding site motif A (P-loop). BELONGS TO THE
                     HELICASE FAMILY, UVRD SUBFAMILY. CONSIST OF THREE
                     SUBUNITS; RECB, RECC|Rv0631c AND RECD|Rv0629c.
                     REMARK-M.bovis-M.tuberculosis: In Mycobacterium
                     tuberculosis strain H37Rv, recB exists as a single gene.
                     In Mycobacterium bovis, a frameshift due to a single base
                     deletion (g-*) splits recB into 2 parts, recBa and recBb."
                     /db_xref="GOA:A0A1R3XWD4"
                     /db_xref="InterPro:IPR000212"
                     /db_xref="InterPro:IPR004586"
                     /db_xref="InterPro:IPR011335"
                     /db_xref="InterPro:IPR011604"
                     /db_xref="InterPro:IPR014016"
                     /db_xref="InterPro:IPR014017"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR034739"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XWD4"
BEGIN
        1 MDRFELLGPL PREGTTTVLE ASAGTGKTFA LAGLVTRYLA ETAATLDEML LITFNRAASR
       61 ELRERVRGQI VEALGALQGD APPSGELVEH LLRGSDAERA QKRSRLRDAL ANFDAATIAT
      121 THEFCGSVLK SLGVAGDNAA DVELKESLTD LVTEIVDDRY LANFGRQETD PELTYAEALA
      181 LALAVVDDPC AQLRPPDPEP GSKAAVRLRF AAEVLEELER RKGRLRAQGF NDLLIRLATA
      241 LEAADSPARD RMRERWRIVL VDEFQDTDPM QWRVLERAFS RHSALILIGD PKQAIYGFRG
      301 GDIHTYLKAA GTADARYTLG VNWRSDRALV ESLQTVLRDA TLGHADIVVR GTDAHHAGHR
      361 LASAPRPAPF RLRVVKRHTL GYDGTAHVPI EALRRHIPDD LAADVAALLA SGATFAGRPV
      421 VAADIAVIVE HHKDARACRN ALAEAGIPAI YTGDTDVFAS QAAKDWLCLL EAFDAPQRSG
      481 LVRAAACTMF FGETAESLAA EGDALTDRVA GTLREWADHA RHRGVAAVFQ AAQLAGMGRR
      541 VLSQRGGERD LTDLAHIAQL LHEAAHRERL GLPGLRDWLR RQAKAGAGPP EHNRRLDSDA
      601 AAVQIMTVFV AKGLQFPIVY LPFAFNRNVR SDDILLYHDD GTRCLYIGGK DGGAQRRTVE
      661 GLNRVEAAHD NLRLTYVALT RAQSQVVAWW APTFDEVNGG LSRLLRGRRP GQSQVPDRCT
      721 PRVTDEQAWA VFAQWEAAGG PSVEESVIGA RSSLEKPVPV PGFEVRHFHR RIDTTWRRTS
      781 YSDLVRGSEA VTVTSEPAAG GRADEVEIAV FAAPGSGADL TSPLAALPSG ASFGSLVHAV
      841 LETADPAAPD LAAELEAQVP GTRRGGPWTS TTRSWLPNWP ERCCRCTTRR WDPPPPH
//