LOCUS       SIT98437.1               112 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 Hypothetical
            protein protein.
ACCESSION   LT708304-62
PROTEIN_ID  SIT98437.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0062A"
                     /note="Mb0062A, len: 112 aa. Equivalent to Rv0061c len:
                     112 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 112 aa overlap). Transferred from
                     H37Rv annotation using Rapid Annotation Transfer Tool
                     (Nucleic Acids Res. 2011 May; 39(9): e57). Conserved
                     hypothetical protein supported by RNA-seq data. Similar to
                     MMAR_3839, 76% identity in 112 aa overlap. Replaces
                     questionable ORF Rv0061 (MTV030.04). Protein product from
                     Mb0062A detected using shotgun mass spectrometry. Mb0062A
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XU77"
BEGIN
        1 MKLKFARLST AILGCAAALV FPASVASADP PDPHQPDMTK GYCPGGRWGF GDLAVCDGEK
       61 YPDGSFWHQW MQTWFTGPQF YFDCVSGGEP LPGPPPPGGC GGAIPSEQPN AP
//