LOCUS       SIT98425.1                84 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 30s
            ribosomal protein s18-1 rpsr1 protein.
ACCESSION   LT708304-56
PROTEIN_ID  SIT98425.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="rpsR1"
                     /locus_tag="BQ2027_MB0056"
                     /note="Mb0056, rpsR1, len: 84 aa. Equivalent to Rv0055,
                     len: 84 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 84 aa overlap). Probable rpsR1, 30S
                     ribosomal protein S18-1, equivalent to
                     NP_302711.1|NC_002677|O53125|RS18_MYCLE 30S RIBOSOMAL
                     PROTEIN from Mycobacterium leprae (84 aa). Also highly
                     similar to others e.g. Q9X8U4|R18A_STRCO 30S RIBOSOMAL
                     PROTEIN S18-1 from Streptomyces coelicolor (78 aa);
                     RS18_B|ACST|P10806 30s ribosomal protein s18 (bs21) (77
                     aa), FASTA scores: opt: 220, E(): 4e-10, (52.2% identity
                     in 67 aa overlap); etc. Also similar to MTCY63A_5 from
                     Mycobacterium tuberculosis. BELONGS TO THE S18P FAMILY OF
                     RIBOSOMAL PROTEINS. Note that previously known as rpsR.
                     Protein product from Mb0056 detected using shotgun mass
                     spectrometry and SWATH mass spectrometry. Mb0056 found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:P69231"
                     /db_xref="InterPro:IPR001648"
                     /db_xref="InterPro:IPR018275"
                     /db_xref="InterPro:IPR036870"
                     /db_xref="UniProtKB/Swiss-Prot:P69231"
BEGIN
        1 MAKSSKRRPA PEKPVKTRKC VFCAKKDQAI DYKDTALLRT YISERGKIRA RRVTGNCVQH
       61 QRDIALAVKN AREVALLPFT SSVR
//