LOCUS       SIT98399.1               202 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 UPF0301
            protein YqgE protein.
ACCESSION   LT708304-39
PROTEIN_ID  SIT98399.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0039"
                     /note="Mb0039, -, len: 202 aa. Equivalent to Rv0038, len:
                     202 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 202 aa overlap). Conserved
                     hypothetical protein, equivalent to
                     MLCB1770_16|Q50191|Y038_MYCLE hypothetical 22.0 kDa from
                     Mycobacterium leprae (202 aa), FASTA scores: opt: 1194,
                     E(): 0, (88.6% identity in 202 aa overlap). Also highly
                     similar or similar to other hypothetical proteins e.g.
                     CAB72194.1|AL138851|SCE59.07c from Streptomyces coelicolor
                     (193 aa); AAC06288.1|AF050466 from Mycobacterium bovis (82
                     aa) (similarity in N-terminus); NP_224347.1|NC_000922|YqgE
                     from Chlamydophila pneumoniae (188 aa); YQGE_ECOLI
                     HYPOTHETICAL 20.7 KD PROTEIN (187 aa), FASTA score: (29.5%
                     identity in 166 aa overlap); etc. Protein product from
                     Mb0039 detected using shotgun mass spectrometry and SWATH
                     mass spectrometry. Mb0039 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="InterPro:IPR003774"
                     /db_xref="UniProtKB/Swiss-Prot:P67758"
BEGIN
        1 MVAPHEDPED HVAPAAQRVR AGTLLLANTD LLEPTFRRSV IYIVEHNDGG TLGVVLNRPS
       61 ETAVYNVLPQ WAKLAAKPKT MFIGGPVKRD AALCLAVLRV GADPEGVPGL RHVAGRLVMV
      121 DLDADPEVLA AAVEGVRIYA GYSGWTIGQL EGEIERDDWI VLSALPSDVL VGPRADLWGQ
      181 VLRRQPLPLS LLATHPIDLS RN
//