LOCUS       SIT98339.1               385 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 DNA
            REPLICATION AND REPAIR PROTEIN RECF (SINGLE-STRAND DNA
            BINDING PROTEIN) protein.
ACCESSION   LT708304-3
PROTEIN_ID  SIT98339.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="recF"
                     /locus_tag="BQ2027_MB0003"
                     /note="Mb0003, recF, len: 385 aa. Equivalent to Rv0003,
                     len: 385 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.5% identity in 385 aa overlap). recF, DNA replication
                     and repair protein (see citations below), equivalent to
                     others Mycobacterial DNA replication and repair proteins
                     e.g. NP_301131.1|NC_002677 from Mycobacterium leprae (385
                     aa); Q9L7L5|RECF_MYCPA from Mycobacterium avium subsp.
                     paratuberculosis (385 aa); P50916|RECF_MYCSM from
                     Mycobacterium smegmatis (384 aa); etc. Also highly similar
                     to others e.g. P36176|RECF_STRCO DNA REPLICATION AND
                     REPAIR PROTEIN from Streptomyces coelicolor (373 aa);
                     NP_440892.1|NC_000911 from Synechocystis sp. strain PCC
                     6803 (384 aa); NP_469352.1|NC_003212 from Listeria innocua
                     (370 aa); etc. Contains PS00017 ATP/GTP-binding site motif
                     A (P-loop), PS00617 RecF protein signature 1, and PS00618
                     RecF protein signature 2. BELONGS TO THE RECF FAMILY.
                     Protein product from Mb0003 detected using SWATH mass
                     spectrometry. Mb0003 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:Q7U314"
                     /db_xref="InterPro:IPR001238"
                     /db_xref="InterPro:IPR003395"
                     /db_xref="InterPro:IPR018078"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR042174"
                     /db_xref="UniProtKB/Swiss-Prot:Q7U314"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MYVRHLGLRD FRSWACVDLE LHPGRTVFVG PNGYGKTNLI EALWYSTTLG SHRVSADLPL
       61 IRVGTDRAVI STIVVNDGRE CAVDLEIATG RVNKARLNRS SVRSTRDVVG VLRAVLFAPE
      121 DLGLVRGDPA DRRRYLDDLA IVRRPAIAAV RAEYERVVRQ RTALLKSVPG ARYRGDRGVF
      181 DTLEVWDSRL AEHGAELVAA RIDLVNQLAP EVKKAYQLLA PESRSASIGY RASMDVTGPS
      241 EQSDTDRQLL AARLLAALAA RRDAELERGV CLVGPHRDDL ILRLGDQPAK GFASHGEAWS
      301 LAVALRLAAY QLLRVDGGEP VLLLDDVFAE LDVMRRRALA TAAESAEQVL VTAAVLEDIP
      361 AGWDARRVHI DVRADDTGSM SVVLP
//