LOCUS SIT60458.1 981 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Hyphal_reg_CWP domain-containing
protein protein.
ACCESSION BX284606-3526
PROTEIN_ID SIT60458.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="C26G2.2"
/locus_tag="CELE_C26G2.2"
/standard_name="C26G2.2a"
/note="Confirmed by transcript evidence"
/db_xref="GOA:A0A1N7SYZ4"
/db_xref="UniProtKB/TrEMBL:A0A1N7SYZ4"
/db_xref="WormBase:WBGene00007751"
intron_pos 36:0 (1/17)
intron_pos 63:2 (2/17)
intron_pos 113:0 (3/17)
intron_pos 148:0 (4/17)
intron_pos 188:1 (5/17)
intron_pos 243:0 (6/17)
intron_pos 277:2 (7/17)
intron_pos 334:0 (8/17)
intron_pos 363:0 (9/17)
intron_pos 393:1 (10/17)
intron_pos 689:1 (11/17)
intron_pos 705:1 (12/17)
intron_pos 745:1 (13/17)
intron_pos 782:2 (14/17)
intron_pos 860:0 (15/17)
intron_pos 909:0 (16/17)
intron_pos 956:0 (17/17)
BEGIN
1 MKRHVVLSLL LYLIAVESKL SRRFKRQTIP SQHIKIHSID SKVNMDRFIN VASMDSRIQL
61 LEKNVNGTFW SASSKMQFDA YDSFVNASFN SQYFHIDIAQ CELLFGNSLE SLLYMTTNRT
121 SDGHSYLTFS LYDNANMTLV EEGIEFQGIN GRRIYVKSET WVRPVEKTIS LGLSDNAIDG
181 ETAVELTIVA PVHNTNVRFV GAEILIKYGP NVVSIDPNFQ KVIVYNDRYS YCLDTKSPGS
241 LHVTFGNGLI NLIGGSSDFN VVISPVDATV NARYLSKTQI DRGDGPIFIS GVPIYETGIT
301 VNSLLLILTL NNNGMLHADC TGAETLLKTS IQNVGLTTEH QEIRINGGVP GLVIESGDVR
361 FEVTKLSGPM AFTYLPGFTL PEDRFENIGP YSDNSTVTPL VFPNPEHLNY TELATDCKGN
421 TINFNITNNL NTSTGYHLVT FPTVGIPGHE QTTTSKMPST DDDYITPEMS STASMEITLS
481 TTSDLTSTYP STFTSSWSTE STVLTTQQQD TTTSVILETT EATDAASSSL SPDDVSTQLT
541 TEATTSVVSS VPPDSSTSKG PLETTTEETS TVEGLTEFST LDPNLFTTTD NIVSVTTNEI
601 LTTTIEEQTT TLPEVYSTTE TPTENPLTTV TEQTVTEATT PISLQSSTTA SELESTTMEA
661 ATTTEVPMET TTISVTTDGY PLPSQLSTDD FVIGHWFSTE EMKIETTTEP SEIGITVSLG
721 NVDFVTPTPT DDGIPIPNDL NINSESSTTS TALPIISATL EVGNSEDGFP EPSRLPQTET
781 TPRKEKMLIL KLQVPDEIDV NSVQFIKNIT ASLRRLVRDV STELRKRRKR SLNVTSIDTR
841 QYHAIPIADS DDVQSIPIKV ENITKSLNIT VVIFALEFDP VVSNGEEELE KALHEVDTYN
901 LHRYFSFEPV EKISFDRTLV NEEKLREVLL ASFVALFLFV IIVVFYLKKK GVLEQLFRKL
961 DRMKCNTLST QPSAFSPNSP N
//