LOCUS       SCN13875.1               978 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans DUF3402 domain-containing protein protein.
ACCESSION   BX284602-2548
PROTEIN_ID  SCN13875.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="farl-11"
                     /locus_tag="CELE_F10E7.8"
                     /standard_name="F10E7.8b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="InterPro:IPR012486"
                     /db_xref="InterPro:IPR021819"
                     /db_xref="InterPro:IPR040185"
                     /db_xref="UniProtKB/TrEMBL:A0A1D3PCL0"
                     /db_xref="WormBase:WBGene00017349"
     intron_pos      11:1 (1/8)
     intron_pos      71:0 (2/8)
     intron_pos      120:0 (3/8)
     intron_pos      170:0 (4/8)
     intron_pos      230:0 (5/8)
     intron_pos      722:0 (6/8)
     intron_pos      750:1 (7/8)
     intron_pos      904:1 (8/8)
BEGIN
        1 MGIRPNFAED VPVYGDKERR SADDEHVEYS ESSLAARRSA NVLKLKQLKE AQPMITPAYG
       61 GFIHHESSDN VAAIDKDLDF EYGDGDAGIR EMAELYSYSE IEEFGINISN WKEYIEESYD
      121 GKHEQFPSTF EEFSAVQKNY VIQDLCSRME SADLEVRLKS ARIILFLLQG SATDFGCLEN
      181 EEIEYQYDQK LLMNVPIRKT KEMDPEGPSM VYHRAIENSF ICYKNGVYQA LCTLLMTEIK
      241 EPFESPPNDG RISKASSRSS RNASLADLSD SEKWRTRQLP TMVDNEMLRV ILAGLYHMIV
      301 QILDERSGRE DETDSDLETR KAFREEVQEP IENGNEPLLI VLFDMLHPFY IGTAPHFPIK
      361 KIVLLIWKIL LLTLGGWEEL TVRKREKRMT AGLDIMEDTI TVAASQAAFI AKDQEHVRNM
      421 AHRAGSFARG GMMARQMAYN DDSKDEDAYS EASSEDSTIA SKKEDSPGAS SSTPPSIPDT
      481 ASNFRQGSGE QTPRVGSPVF PVIQKKTLPW RSKTNAQDIE DFIQKGRFKY FNYDFDPGDD
      541 TTLFGLPPSF CGAVKILRNN MYTSLTELQV KKDEELNRYL FSMKEDIPET KTETLYRKIL
      601 PNLSQYICAL VKVMVSSVPS TKARHEGLNV LIDCLTPEME ASDILSNSIS LDNSTSSPLE
      661 EGFRLAIDIN RHKEIIVKSL SAILLLLVKH FKLNHIYQFE YICQQIVYVN GIPLILKFLD
      721 QNTNKLIQSR HEIYAYNYPQ CLYHYVRNNE EWPILTQDNI EEPRPPGAGP YFMWRNVFFA
      781 INLIRLLNKL VKAKNDRVKM LMVFKSAPVL KRLFKVRVSV LQLYVLKAIK MQSRYLGRQW
      841 RKSNMDIISA IYSRVRHRMT DDWAFASDIK RKCDYQKEDS LIKASIERFH SRRYSALYPQ
      901 FAIEVNDAPM PGDDYLNRVD MRDFEPVDTC AHSVLGANLK LGRHFKKDYE KWLEQEVFNA
      961 SIDWDKLLIE TRGVEDLM
//