LOCUS SAP35530.1 628 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Rab-GAP TBC domain-containing protein protein. ACCESSION BX284602-4611 PROTEIN_ID SAP35530.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 15279421) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="II" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="tbc-14" /locus_tag="CELE_E01G4.1" /standard_name="E01G4.1a" /note="Confirmed by transcript evidence" /db_xref="InterPro:IPR000195" /db_xref="InterPro:IPR021935" /db_xref="InterPro:IPR035969" /db_xref="UniProtKB/TrEMBL:A0A168H1X0" /db_xref="WormBase:WBGene00008444" intron_pos 37:0 (1/7) intron_pos 130:1 (2/7) intron_pos 206:0 (3/7) intron_pos 300:0 (4/7) intron_pos 387:1 (5/7) intron_pos 493:1 (6/7) intron_pos 565:0 (7/7) BEGIN 1 MLPYMAYRYV KNKREKNQRE MDSDLDSMVR SIVPDKTVIC VPNVAAKLGE DSKEYIPGTL 61 SIVEKSSGVF IEWKPSEDAE TSWVMTSDDG NTEMVHARSP EEKQKCGARV AFSMDVNDLS 121 SFRNDEPKRG SGGFPSIRLI CRDGSSQVPL FFKNTTTAEF LDRLQGYITL RRSHRDSHLV 181 IVVDQKSEAL AKSVSMLDEN GDILSRFMQN PYMTAMTGFS KITSFVQDQV IPSVLNDTDA 241 VTQEEKIRLM RELRLAEEQM RVHSDAAGEF EVVTQLELPP RPEIYRELPV SKDLWNSFKL 301 SNGSYDPMKL HHLKMNVFRG GLNAELRKEA WKCLLGYRQW HESDTDFQTR RAELAKQYEN 361 MKKQWMSVTE DQEKRFTKFV KRKSLVEKDV ARTDRTVPFF QGDDNVNLVH LHNVLMTYVM 421 YNFDLGYVQG MSDFASPLLF VMKDEVDTFW CFVGLMELTQ KNFETDQAFI KLQMNQLRDL 481 VMIINPKLAN YLESEKSDDM YFCFRWVLVW FKREFSFLDT CKLWEVLWSG QPCPRFLLLI 541 CVAILDSQTN IIIDNQFGLT EILKHINDLS MHLKVDEILT AAEAIFHQLS ASQNKLPAHI 601 CQYLNIGESA VSSSNNSPSK SDPDRVDL //