LOCUS RID72093.1 1077 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-4299
PROTEIN_ID RID72093.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C03999"
/db_xref="Phytozome:Brara.C03999"
intron_pos 654:2 (1/3)
intron_pos 723:1 (2/3)
intron_pos 805:0 (3/3)
BEGIN
1 MLFLLFFYFL FSSSALADRR VLHEPFFPVD SPPPSPPQSP PLPKLPFSST TPPDATSPPF
61 FPTYPSPPPP PSPASFASFP ANISSLIVPH ATKSPPSSKK LLIAAISAVT SAALVAALIA
121 LLYWRRRRGR SSQESNAPDD SKTWTTDSSR RVYPPPPPTT AAPSARRNAE GRASKQRTTT
181 TTARSSANTS SEFLYLGTMV NPRGVEDHQS VSNRSNNGSS SRKLESPDLQ PLPPLMKRSF
241 RLNPEVGSIG EEDEEEFYSP RGSASGRETL TRVGSESRRV FSSVPNQNVR SVNNDTISCS
301 SSSSGSPGRS TFISISPSMS PKRSEPKKTV ISAPEPPPKT SPGSSESSPS KITDFRLVRS
361 PSLSLASLSP RLCPGKIAEG GGLGQISRSP TVTSLTTSPE RENKEENSLQ NLDDDSPRSS
421 SRSSASTSPE RRPNDTPEAY LRSPVHSSAS TSPYRCFQKS PEVLPAFMSN LRQGLQSQLL
481 SSPGQGFLNE LDALRSEKTS HKSPPEKGSH DPQSASSSSL SSSPDRDFSH SLDVSPRISN
541 ISSQILQPPV SAARVQPPPP PPPPPPFPTW ARRNQASSKA SRPPPLTPPS NPFVIPSENL
601 PKTSPEETHK ETFSANEPAE ETPKPKLKAL HWDKVRASSD REMVWDQLRS SSFKLDEEMI
661 ETLFVAKSLD SKPNQSQTTP RCVLPSPNQE NRVLDPKKAQ NIAILLRALN VTIEEVCEAL
721 LEGNAETLGT ELLESLLKMA PTKEEERKLK EYKDDSPVKL GHAEKFLKAM LDIPFAFKRV
781 DAMLYVANFE SEVEYLKNSF ETLEAACEEL RNSRMFLKLL EAVLKTGNRM NVGTNRGDAH
841 AFKLDTLLKL VDVKGADGKT TLLHFVVQEI IRAEGTRLSG DNNTQTDDIK CRKLGLQVVS
901 SLSSELSNVK KAAAMDSEVL SSYVSKLSQG IAKINEAIQI QSTVTEESGS SCSERFLESM
961 NTFLKRAEED IIRVQAQESV ALSLVKEITE YFHGNSAKEE AHPFRIFLVV RDFLGVVDRV
1021 CKEVGMINER TMVSSAHKFP VPVNPMLPQP LPGLFGRKQS SSSSSSSSSD DEHNSSH
//