LOCUS RID63692.1 1397 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010632-2889
PROTEIN_ID RID63692.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 28488603)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 28488603)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A5"
protein /locus_tag="BRARA_E02676"
/db_xref="Phytozome:Brara.E02676"
BEGIN
1 MARSYSSNSA NVMIERINSS QELVELCKGK SSSALLKRLK VALATVHPVI ADADQKADHV
61 REVKHWLTGL TDAFFQAEDV LDELLTEALR RRVVAEMGGF GGLFQNLMGG NEANKNKIER
121 KMENVVRLLE HHVRHIEIIG LKEYSETREP QWRQASRSRP DDLPQGRVVG RAEEKVALLN
181 LLLSDDETGI RRPALVSTVG MPGVGKTTLT QIVFKDDSVT NHFDVKMWVS VGLNFNVFTV
241 TKAFLQEITS SAVNTEDLPS LQLQLKQELS GKRFLLVMDD IWSESGTEWE SFKVAFTDAE
301 EGSKIVITTR SEIVSTAAQA DKVYRVKLMT NEECWELISR SAFGNISVGS INQELEGIGK
361 KIAEQCKGLP LTARAIASHL RSKPNPDDWY DVSKNFSTYT NSILPVLKLS FDTLPPVLKR
421 CFSLCSIFPK GYVFNREELV LLWMAIDLLY QPRSNKRLEE IGYDHIDDLV DRSFFLRLDI
481 TTKSFVMHDL MNDLAKAVSG DFCFRMEDDN IAEAPSMARH FSFSRSHCDA SMAFRSVSGA
541 KFLRSILPFN VPTGLESLQL TEKMLNPLLQ ALSSLRILSL SHYQITRLPK SLKGLKQLRY
601 LDLSSTKIKD LPEFVCTLCN LQTLLLSNCR YLTSLPTSIA ELINLRLLDL VGTPLVEMPL
661 GIRKLRSLQK LSNFVVGRLS GAGLHELKEL SNLRGTLRIS ELQNVAFASE AKDAGLKRKQ
721 FLDGLILKWT VNASSFVPGS LSALACDQKE VLKMLEPNTN LKTFRIESYQ GSEFPKWLGD
781 SSFSGITNVT LSSCNLCISL PPLGQLPSLK YLSIEKFNIL LKVGLDFFGE NTSTFVPFQS
841 LLTLKFYAMP RWEEWTCPEL EGGIFPCLQK LMIEKCPRLR KTFPDGLPPS TEVAISDCPL
901 RAVGGGEGSS PGNTSITDPP PSNPSSQSDI GTSSQSNNDT EVTSTSSMSS LPKNHPLSEE
961 MDQYITQLES SHQHIEEPAV ISARFSELIS SADLSSILSQ SPLRLDPKNR GFGQPGSSSN
1021 QNQQQEQLLV PSGPSSDNGI TRPSQSIDET DIEYLKVTDI SHLMELPQNL QSLHIDTCDG
1081 LTSLPESLSE SHPNLHELLL VACHSLESFP PTTLKTLYIR DCKKLNFQES LQPTRSYSQL
1141 EHLSIETSCS NNLITFPLSL FPKLKSLSIT ACESFRTFSI HAGLGDDRIA LKSLEIRDCP
1201 NLTTFPPGGL PTPKLSSILL SNCENLRALP EKLFGLTSLQ SLFVIKCPKL DSIPGGGFPS
1261 NLRTLCINLC PKLTPRIEWG LRDLENLRNL EIEGGNEDIE SFPDEGLLPR GLFSLRISRF
1321 ENLSTLNRLG FRDTKGLETI EIDGCDKLRI SMEEDLPASL SCLRISSCSL LSEKLAEEGR
1381 ECVFSIPYVE IDGEIFS
//