LOCUS RID62032.1 1457 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010632-1229
PROTEIN_ID RID62032.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 28488603)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 28488603)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A5"
protein /locus_tag="BRARA_E01130"
/db_xref="Phytozome:Brara.E01130"
intron_pos 31:0 (1/5)
intron_pos 1197:0 (2/5)
intron_pos 1278:0 (3/5)
intron_pos 1330:0 (4/5)
intron_pos 1381:0 (5/5)
BEGIN
1 MEEATQVASS EVPVVKGDAV DLKTVDISVK AVNGEATKEG KDEEDTTFDG EFIKVEKETF
61 DAKDDAKKAE DIPVQEQKQV SSGSERELHE SQEKAKELEL ELERVAGELK RYESENTHLK
121 DELLSAKDKL QETEKKQGEL EAVQKKQQEK IVEAEERYSS QLKSLEDALQ SHDAKDKELT
181 EVKEAFDALG IELENSRKKL IELDEGLKRS AEEAQKFEEL HKQSASHADS ETQKALEFAQ
241 LLESTKVSAK EMEEKMASLQ QEIKELNNKI SENEKVEAAL KSSAEALAAV QEELALSKSR
301 LLETEQKVSS TEALIAELTQ ELEQKKASES RLKEELLVLD DLVVQTKDLQ AKLSEQEGIN
361 VKLAEEVREK ERLESLSKDQ EEKLNTANEK LAQVLKEKEA LEADVALVTS NAVKVKEVCS
421 ELEEKLKTSE DNFTKTDDLL SQALSNKSEL EQKLKSLEEA HNETGTVAAA ATQKNLELEE
481 AVRSSNQAAE EAKAQIKELE TQFTAAEQKN VELQQQLNLL QLKSGEAEQE VKELSEKVSE
541 LKSAVEVAEE EKKQATTQLQ EYKEKASELE SSLNQSSSRN SELEEDLRIA LQKGAEHEDR
601 ANTTHQRSIE LESLCQTSQS KHEDAEGRLK DLEILLQTEK NKIQELEEQV SSLEKKCGET
661 EADSKGYLGQ VAELQSTVEA FQVKTSSLEA ALNIATEKEK ELAENLNAVM GEKKILEGTV
721 NEYSAKISES ENLLESLRNE LSATQGKLES IENDLKSAGL RESEVMEKLK SAEESLEHKG
781 REIDEAMKKS MELEALHQSL SIDSEQRIQK VMEDFTSRDS EANSLTEKVK EFEDRIKSYE
841 EQLVEASGKY SSLKEELDQT LGKLAAAETV NDKLKQEFDQ VQERSSQSSS ENELLAETNN
901 QLKIKLQELE GLLGSSSTEK EAAMKQVEEA VEKFNQKDAE HKDLVEKLKT HENEIEVHKK
961 LAHEASGVAD TRKVELEEAL SKLKNLESTI EEALTVNDKL KQEFNQAQEK LSQSSSENEL
1021 LAETNNQLKI KIQELDGLLG SSSTEKEAAM KQVEEAVERF NQKDAEHKDL VEKLKTHENE
1081 IQEHKRLAHE VSGVADSRKV ELEEALSKLK NLESTVKELG VKCQGLEKEN GDLAEVNLKL
1141 NQALATHGSE ANELQTKLSA LEAEREQTTK DLQASKTASE DLIKQLTSEG DKLKSQISSL
1201 TEENNQVNEI FQSTKVELQS VIAKLEEQVT LERSKADTLV SEIEKLKAVA AEKSVLESHV
1261 EELEKTLKKF EAQLKEEVEN ATAASVKVSE LTSKLQEGEH IASDRDVLSE QVLQLQKELQ
1321 AAQSSIAEQK QEHSQKHSEL ESALKLSQEE IEAKKKAVTD FESMVKDLEQ KVQLADAKAK
1381 ETEAKDVSIK SRDIDLSFSS PTKRTSKKKS EASPSSSSSS NVTATQTATT SHLMTVKIIT
1441 GVALISVIIG IILGKKY
//