LOCUS QOD51167.1 3152 aa PRT BCT 28-SEP-2020
DEFINITION Pseudomonas aeruginosa non-ribosomal peptide synthetase protein.
ACCESSION CP058257-2559
PROTEIN_ID QOD51167.1
SOURCE Pseudomonas aeruginosa
ORGANISM Pseudomonas aeruginosa
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6580692)
AUTHORS Alamri,A.M. and Alnimr,A.M.
TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas
aeruginosa
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6580692)
AUTHORS Alamri,A.M. and Alnimr,A.M.
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: 20-JUN-2020
Assembly Method :: SOAPdenovo v. 1.05
Genome Representation :: Full
Expected Final Version :: Yes
Reference-guided Assembly :: NC_002516.2
Genome Coverage :: 100.0x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 06/29/2020 17:07:23
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 6,083
CDSs (total) :: 6,023
Genes (coding) :: 5,942
CDSs (with protein) :: 5,942
Genes (RNA) :: 60
tRNAs :: 56
ncRNAs :: 4
Pseudo Genes (total) :: 81
CDSs (without protein) :: 81
Pseudo Genes (ambiguous residues) :: 6 of 81
Pseudo Genes (frameshifted) :: 33 of 81
Pseudo Genes (incomplete) :: 47 of 81
Pseudo Genes (internal stop) :: 7 of 81
Pseudo Genes (multiple problems) :: 10 of 81
CRISPR Arrays :: 3
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa"
/mol_type="genomic DNA"
/strain="PA179"
/isolation_source="blood"
/host="Homo sapiens"
/db_xref="taxon:287"
/country="Saudi Arabia: Khobar"
/lat_lon="26.217192 N 50.197140 E"
/collection_date="2017"
/collected_by="Aisha Alamri"
protein /locus_tag="HWH41_12875"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020750900.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MPLSPNGKLD RKALPAPEVS VAQAGYSAPR NAVERTLAEI WQDLLGVERV GLDDNFFSLG
61 GDSIVSIQVV SRARQAGLQL SPRDLFQHQN IRSLALAAKA GAATTEQGPA SGEVALAPVQ
121 RWFFERAIPN RQHWNQSLLL QARQPLDGDR LGRALERLQA QHDALRLRFR EERGAWHQAY
181 AEQAGEPLWR RQAGSEEALL ALCEEAQRSL DLEQGPLLRA LLVDMADGSQ RLLLVIHHLA
241 VDGVSWRILL EDLQRLYADL DADLGPRSSS YQTWSRHLHE QAGARLDELD YWQAQLHDAP
301 HALPCENPHG ALENRHERKL VLTLDAERTR QLLQEAPAAY RTQVNDLLLT ALARATCRWS
361 GDASVLVQLE GHGREDLGEA IDLSRTVGWF TSLFPLRLTP AADLGESLKA IKEQLRGVPD
421 KGVGYGLLRY LAGEEAATRL AALPQPRITF NYLGRFDRQF DGAALLVPAT ESAGAAQDPC
481 APLANWLSIE GQVYGGELSL HWSFSREMFA EATVQRLVDD YARELHALIE HCCQEGNVGA
541 TPSDFPLATL HQEQLDRLPL ARIEDIYPLS PMQHGMLFHS LYEQASGDYL NQLRVDVHGL
601 DPARFRAAWQ AALDSHDILR AGFLWQGDLE QPLQVIHKHL ELPFAEHDWR GREALAEALD
661 ELAASERRRG FELEQAPLLR LVLVRMDEER YHLVYTHHHI LLDGWSSAQL LGEVLARYTG
721 EQAERTGGRY RDYIAWLQAQ DKRVSEAFWK EQLAELLEPT RLAQAVAAER EQVGSGQFQR
781 SLPPARTARL KTFAQRHAVT LNTLVQAAWS LLLQRYTGQD TVVFGATVAG RPAELAGIER
841 QIGLFINTLP VVATPQPGMR LTDWLQEVQA RSLALREQEH TPLFEIQRWA GLGEALFDSL
901 LVFENYPVAE ALEKGSPGGV RFGPVSNHEQ TNYPLTVALG VGDSLTLQYS YDRQAFSDAA
961 VEQLDRHLLN LLEGFVDNAE RTLVELSLLD AEERALIDSL WNRSESGFPA SPLIHQRVAE
1021 RARLAPDAPA VLFDDQVLSF AELDSRANRL AHALIARGVG PEVRVAIAMQ RSAEIMIAFL
1081 AVLKSGGAYV PLDIEYPRER LLYMMQDSRA HLLLTQNHLL DRLPIPDGLS CLCLDREQEW
1141 AGFPAHDPEV ALHGDNLAYV IYTSGSTGMP KGVAVSHGPL AAHIVATGER YEMTPADCEL
1201 HFMSFAFDGS HEGWMHPLIN GARVLIRDDS LWLPEQTYAQ MHRHGVTVAV FPPVYLQQLA
1261 EHAERDGNPP AARVYCFGGD AVAQASYDLA WRALRPQYLF NGYGPTETVV TPLLWKARPD
1321 DPCGAAYMPI GTLLGNRSGY ILDAQLNLLP VGVAGELYLG GEGVARGYLE RPALTAERFV
1381 PDPFGAPGSR LYRSGDLTRG RADGVVDYLG RVDHQVKIRG FRIELGEIEA RLREQAAVRE
1441 AVVVAQAGAS GQQLVGYVVP HDPALAEDVG AQAACRDALR KALKERLPEY MLPAHLLFLA
1501 CMPLTPNGKL DRKGLPKPSA DQQQRDYQAP RSEVERQLAT IWAEVLKLEQ VGLADNFFEI
1561 GGDSIISLQV VSRARQLGIH FTPKMLFEAQ TIGALAPLAE SGTQVLAIDQ GPVTGVTPLL
1621 PIQQGFFAEK VAERHWWNQS VLLEAREPLD ARLLEQALRG VLAHHDALRL SFTREAAGWT
1681 ARHRGVEEGA AALLRVARVA DLAALRALAD EVQRSLDLAD GPLLRALLAT FDDGSQRLLL
1741 VIHHLVVDGV SWRILFEDLQ TAYRQLLAGQ TVELPAKTSA FRDWAERLQA FAGDGGLDGE
1801 LAYWQGQLQG ASSDLPCLDP LGDQSNRHAR SVSCGLDAEA TRQLLQEAPA AYRTQVNDLL
1861 LTALARVICR WTGQVDALIQ LEGHGREELF AEIDLTRTVG WFTSLFPLRL TPAEGIAASI
1921 KGIKEQLRAV PNKGIGFGAL RYLGSAASQA ALAGLPVPRI TFNYLGQFDG SFAMDEGALF
1981 VPAGERAGDD QSPDAPLANW LALNGRIYGG ELRIDWSFSG ERFETTSIQR LADAYRDELL
2041 ALIAHCRVAE GQGLTPSDFP LARLDQARLD QLPLAPCEVE DLYPLSPMQQ GMLFHSLYQQ
2101 EAGDYINQLR VDIDGLHPES FRAAWQAALD EHDVLRSGFL WQGAFETPLQ VVRKRVEVPF
2161 SVLDWRGRED LAAALDELAA GEGRLGFDLS EAPLLRLVLV RTDEERYHLI YTNHHILMDG
2221 WSNSQLLGEV LQRYRGETPP RSGGRYRDYI AWLQRQDAAL AEAFWLPRLR QLDEPTRLGQ
2281 SIAQARQRGK GYAERLRELD GEQTRRLAEL AREQKITVNT LVQAAWLMLL QRYTGQDSVA
2341 FGATVAGRPA ELNGIEEQIG LFINTLPVIA SPLPQQSLAS WLQAVQGENL ALREFEHTPL
2401 YDIQRWAGQG GEALFDNILV FENYPVSQML QQQASQGLAF GAVGNHEQTN YPLTLSVSLG
2461 QRLELQFAYD REHFDDASVA RLDRHLTHLL AQMVERPAST CLAEFQLLEA AERRQAIFDW
2521 GRNPGRYPDE RSVEQLFASR AAMEPERVAL LFEERQLSYG ELNAQANRLA HRLIELGVGP
2581 DVLVGIAVER GLEMIVSLLA VLKAGGAYVP LDPEYPQERL GYMIEDSGIA LLLSQSHLLQ
2641 RLPAASGIAC LALDQARDWQ DRPASDPQLR AHPQNLAYVM FTSGSTGRPK GVGISRESLS
2701 RHTHVSLEFF GIGPDDRVLQ FSTFNFDGFV EQLYPPLACG ASVVLRGTEI WDSETLYREI
2761 VERRITTVDL TTAYWNMLAK DFANQGVRDY GALRQVHAGG EAMPPESLVA WKAAGLEHVR
2821 LLNTYGPTEA TVTVTTLDCA PYVDGSKAIP ATMPIGKVLP GRAIYLLDDA GQPAPVGAVG
2881 ELVIGAELLA RGYFKRPDLT AARFIPDPFD EQGGGRLYRT GDLARYGADG VIEYVGRVDH
2941 QVKVRGFRIE LGEIEACLGE HPAVREALVI AVEGAAGAQL VAYLVPQAEA LASATLEVQA
3001 ALRNELKALL RDNLPEYMVP AHLLFLERLP LSPNGKVDRK ALPAPDASLL QEAYVAPRSE
3061 LECQVAAIWQ EVLKLQRVGL DDHFFELGGH SLLAINVISR IQLELGMKLT PQLLFQFPTL
3121 GLFVSNLEKA GGQVDTSKLN KLEALLDEME EV
//