LOCUS QOD50600.1 735 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa mechanosensitive ion channel family protein protein. ACCESSION CP058257-5522 PROTEIN_ID QOD50600.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_27890" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_253808.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPIFARFTLR SRVLAALLLC LCAALFYSPP GAAALPNPLA GSSSGGEKVS DAQLEQSLNQ 61 VIQTLENDRQ RADLLKKLKQ LRDVTKKGKE SEGGVLGLIG DTLTSLEKQF QGANSPVALW 121 GNQFQLARAE LEERFPSWRD LPAMVFDFSV VILLWACLAS ALLWLSRRMR ERFGLSAELP 181 QHPKTRDLLL FSLRKLGPWL VAFLITLYLS VVLPDSLSKT LAMVMAYVLV CGTLFSALCV 241 ISLSLLSGPH RQRALDILRR QAFRPLWLIG SLAALGEVAH DPRLIAGLGE HTSICLSTLA 301 NASAALFTAL FVMRFRRPIA HLIRNQPLER RLKRRSLHDL VQLVGSLWFV PVLVLVGISL 361 FATFVSAGDS SSALRRALVC AVLAVVAMTV IGLIRRRSSR VGAGPRRSAP YIEQLQSFGY 421 TLLHIFVVLF FIEVALRVWG MSLIRYAEGE GEQISMKVVS FGTTLLVAWL IWILTDTAIQ 481 HSLGLGGKSR PNTRALTMLP LIRNVLFATI AVIALIVALA NMGMNVTPLL AGAGVIGLAI 541 GFGAQSLVAD LITGLFIIIE DSLSIDDYVD VGGHLGTVEG LTIRTVRLRD LDGVVHTIPF 601 SEIKSIKNYS RQFGYAMFRW PVPASMPIDD AVALVREVAM ELRSDPAVYR NLWSPMELQG 661 VESFDNGQAI LRFRFKTAPI KQWEVQRAFN LRLRRRLDQA GLELSMPRLN VQLSRAPKAK 721 SAEPDEQGTP ADGGI //