LOCUS QOD50447.1 629 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa DNA topoisomerase IV subunit B protein. ACCESSION CP058257-5365 PROTEIN_ID QOD50447.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /gene="parE" /locus_tag="HWH41_27105" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_253654.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MATYNADAIE VLSGLDPVRK RPGMYTDTTR PNHLAQEVID NSVDEALAGH AKSVQVILHQ 61 DNSLEVIDDG RGMPVDIHPE EGVPGVELIL TKLHAGGKFS NKNYQFSGGL HGVGISVVNA 121 LSTRVEVRVK RDANEYRMTF ADGFKDSDLE VIGTVGKRNT GTSVHFWPDP KYFDSAKFSV 181 SRLKHVLKAK AVLCPGLSVV FEDKNTGERV EWHFEDGLRS YLTDAVAELP RLPDEPFCGN 241 LEGSKEAVSW ALLWLPEGGE SVQESYVNLI PTAQGGTHVN GLRQGLLDAM REFCEFRNLL 301 PRGVKLAPED VWERIAFVLS MKMQEPQFSG QTKERLSSRE AAAFVSGVVK DAFSLWLNEH 361 AEIGLQLAEL AISNAGRRLK AGKKVERKKI TQGPALPGKL ADCAGQEPMR AELFLVEGDS 421 AGGSAKQARD KEFQAIMPLR GKILNTWEVD GGEVLASQEV HDIAVAIGVD PGASDLAQLR 481 YGKICILADA DSDGLHIATL LCALFVRHFR PLVEAGHVYV AMPPLYRIDL GKEIYYALDE 541 AERDGILERL AAEKKRGKPQ VTRFKGLGEM NPLQLRETTM DPNTRRLVQL TLEDATGTLE 601 IMDMLLAKKR AGDRKSWLES KGNLAEVLV //