LOCUS       QOD49722.1               945 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa excinuclease ABC subunit UvrA protein.
ACCESSION   CP058257-4610
PROTEIN_ID  QOD49722.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="uvrA"
                     /locus_tag="HWH41_23245"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_252924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MDKILIRGAR THNLKNVDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
       61 ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC
      121 PDHDIPLEAQ TVSQMVDQVL ALPEGSKLML LAPVIRERKG EHLAVFDEMR AQGFVRARVD
      181 GKLYELDEVP KLDKQKKHSI DVVVDRFKVR ADLQQRLAES FETALSLADG IALVAPMDED
      241 EDVEEIIFSA RFACPVCGHS ISELEPKLFS FNNPAGACPT CDGLGVKQFF DARRVVNGEL
      301 TLAEGAIRGW DRRNVYYFQM LGSLAQHYGF SLEEPFDELG AEHQKVVLYG SGRENVDFRY
      361 LNDRGDIVKR SHPFEGILPN LERRYRETES ATVREELAKF LSTQPCPDCH GTRLRREARH
      421 VWVGDRTLPA ITAMPVGEAC EYAAGLSLTG RRGEIAAKIL KEIRDRLQFL VNVGLDYLTL
      481 DRSADTLSGG EAQRIRLASQ IGAGLVGVMY ILDEPSIGLH QRDNERLLGT LTHLRNLGNT
      541 VIVVEHDEDA IRLADYVVDI GPGAGVHGGQ VVAEGTPDQV MNHPDSLTGK YLSGRKKIAV
      601 PAKRTPRDKK KLLKLKGARG NNLQNVNLEI PVGLFTCITG VSGSGKSTLI NNTLFPITAT
      661 ALNGATTLEV APYDSFDGLQ HLDKVVDIDQ SPIGRTPRSN PATYTGLFTP IRELFSGVPE
      721 ARSRGYGPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDVCKGKR YNRETLEIRY
      781 KGKSIHEVLE MTIEEAREFF DAVPALARKL QTLMDVGLSY IKLGQSATTL SGGEAQRVKL
      841 SRELSKRDTG KTLYILDEPT TGLHFADIQQ LLDVLHRLRD HGNTVVVIEH NLDVIKTADW
      901 LVDLGPEGGS KGGQIIANGT PEQVAEMPQS HTGHFLKPLL ERDRA
//