LOCUS QOD49722.1 945 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa excinuclease ABC subunit UvrA protein. ACCESSION CP058257-4610 PROTEIN_ID QOD49722.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /gene="uvrA" /locus_tag="HWH41_23245" /EC_number="3.1.25.-" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252924.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDKILIRGAR THNLKNVDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY 61 ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC 121 PDHDIPLEAQ TVSQMVDQVL ALPEGSKLML LAPVIRERKG EHLAVFDEMR AQGFVRARVD 181 GKLYELDEVP KLDKQKKHSI DVVVDRFKVR ADLQQRLAES FETALSLADG IALVAPMDED 241 EDVEEIIFSA RFACPVCGHS ISELEPKLFS FNNPAGACPT CDGLGVKQFF DARRVVNGEL 301 TLAEGAIRGW DRRNVYYFQM LGSLAQHYGF SLEEPFDELG AEHQKVVLYG SGRENVDFRY 361 LNDRGDIVKR SHPFEGILPN LERRYRETES ATVREELAKF LSTQPCPDCH GTRLRREARH 421 VWVGDRTLPA ITAMPVGEAC EYAAGLSLTG RRGEIAAKIL KEIRDRLQFL VNVGLDYLTL 481 DRSADTLSGG EAQRIRLASQ IGAGLVGVMY ILDEPSIGLH QRDNERLLGT LTHLRNLGNT 541 VIVVEHDEDA IRLADYVVDI GPGAGVHGGQ VVAEGTPDQV MNHPDSLTGK YLSGRKKIAV 601 PAKRTPRDKK KLLKLKGARG NNLQNVNLEI PVGLFTCITG VSGSGKSTLI NNTLFPITAT 661 ALNGATTLEV APYDSFDGLQ HLDKVVDIDQ SPIGRTPRSN PATYTGLFTP IRELFSGVPE 721 ARSRGYGPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDVCKGKR YNRETLEIRY 781 KGKSIHEVLE MTIEEAREFF DAVPALARKL QTLMDVGLSY IKLGQSATTL SGGEAQRVKL 841 SRELSKRDTG KTLYILDEPT TGLHFADIQQ LLDVLHRLRD HGNTVVVIEH NLDVIKTADW 901 LVDLGPEGGS KGGQIIANGT PEQVAEMPQS HTGHFLKPLL ERDRA //