LOCUS QOD49517.1 643 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa sigma-54-dependent Fis family transcriptional regulator protein. ACCESSION CP058257-4392 PROTEIN_ID QOD49517.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_22155" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252710.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPASSMSRHA RQVLTVAQGK IPPGGPATDP SIARSWLRCL EQHHLDPGQP MAPMVLEHAR 61 MLERRERLQQ VLEIADGEMH SLYQQLSGND HAVLLTDARG VILNCVNADA QRQTFEHAGL 121 WLGADWSEPC EGTNGIGTCV VERQALTIQQ EEHFRSRHTG LTCSASPVFD PQGELMAVLD 181 VSSARQEVSR QSQFHTMALV NLSAKIIEGC YFLRRFEGSW LLRFHVQGDY VGLFSEGLLA 241 FEEDGRIRAV NQSALNLLGC PRQRLLGQPV ETFFDCRLDD LLGRASPQPS ASWPLRTREG 301 RTLYAMLRGA PRAIPQGLAV PTAAKPAPAA PGLCLGDAEL AADFRRALKV YARDVPLLLN 361 GETGSGKEAF AKAVHLAGPR AEQAFVALNC AAIPETLIES ELFGYRGGSF TGARKEGMRG 421 KLQQADGGTL FLDEIGDMPL ALQTRLLRVL EERRVVPLGG EPEDVDVRLI SATHRDLAEL 481 VADGRFREDL YYRLNGMVVS LPPLRERSDR EELLDYLLAE EARGQRIQLD GEVRQGLLAY 541 RWPGNVRQMR TVLRTLVALC EDGRVGLRDL PADIRQALAA LPPAAAAPAP AAGNSLDDAE 601 RAALLAALDG QRWHVSRVAE QLGISRNTLY RKLRRHGLVR GQA //