LOCUS QOD48516.1 670 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa excinuclease ABC subunit B protein. ACCESSION CP058257-3342 PROTEIN_ID QOD48516.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /gene="uvrB" /locus_tag="HWH41_16880" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_251828.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDTFQLDSRF KPAGDQPEAI RQMVEGLEAG LSHQTLLGVT GSGKTFSIAN VIAQVQRPTL 61 VLAPNKTLAA QLYGEFKTFF PHNSVEYFVS YYDYYQPEAY VPSSDTYIEK DSSINDHIEQ 121 MRLSATKALL ERPDAIIVAT VSSIYGLGDP ASYLKMVLHL DRGDRIDQRE LLRRLTSLQY 181 TRNDMDFARA TFRVRGDVID IFPAESDLEA IRVELFDDEV ESLSAFDPLT GEVIRKLPRF 241 TFYPKSHYVT PRETLLEAVD QIKAELKERL DYLRNNNKLV EAQRLEQRTR FDLEMILELG 301 YCNGIENYSR YLSGRAPGEP PPTLYDYLPA NSLLVIDESH VSVPQVGAMF KGDRSRKETL 361 VEYGFRLPSA LDNRPLRFEE WEAVSPQTIF VSATPGPYEA EHAGRVIEQV VRPTGLVDPE 421 IEVRPAMTQV DDLLSQIRQR VAKDERVLVT TLTKRMAEDL TDYLGDHDVR VRYLHSDIDT 481 VERVEIIRDL RAGAFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA 541 ARNLHGKAIL YADNVTGSMQ RAIDETERRR AKQIAFNEAH GIVPKGVRKD IKDILEGAVV 601 PGARGKRKGV AKVAEESGRY ENELRSPSEI SKRIRQLEEK MYQLARDLEF EAAAQLRDEI 661 QTLRERLVNV //