LOCUS       QOD48482.1               502 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa GspE family T2SS ATPase variant
            XcpR protein.
ACCESSION   CP058257-3307
PROTEIN_ID  QOD48482.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="gspE"
                     /locus_tag="HWH41_16685"
                     /gene_synonym="xcpR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_251793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MMTAPLPDIA APAAPPRRLP FSFAKRQGLL FLCLEEQYWL ACRPQVELAA IAEAQRFAGR
       61 RLPLKALGED AFNQALAASY QHDSSAAMQL AEDLGGSLDL AALADQVPET EDLMEQEDDA
      121 PIIRLINAIL GEAIRENASD IHLETFEKRL VVRFRVDGVL REVLEPKREL AALLVSRIKV
      181 MARLDIAEKR IPQDGRISLR VGGREVDIRV STLPSANGER VVLRLLDKQA GRLNLQHLGM
      241 SERDRKLMDE TVRKPHGILL VTGPTGSGKT TTLYASLTTL NDRTRNILTV EDPIEYHLEG
      301 IGQTQVNAKV DMTFARGLRA ILRQDPDVVM VGEIRDRETA EIAVQASLTG HLVLSTLHTN
      361 SAIGAITRLV DMGIEPFLLS SSMLGVLAQR LVRVLCPACK EPYRADEAEC ALLGVDPAAP
      421 PTLHRARGCG ECHQHGYRGR TGIYELVVFD DHMRSLIHNE SSEQEMTRHA RTSGPSIRDD
      481 GRRKVLEGVT TVEEVLRVTR EE
//