LOCUS       QOD47911.1              1221 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa translocation/assembly module TamB protein.
ACCESSION   CP058257-2718
PROTEIN_ID  QOD47911.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_251232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKALKITLLA IVGLLLALLL GLAALLGTQA GSAWLLGRVP GLQVSGFEGR LGGAWQAQRL
       61 SWAQDGTQLV VERPELRWSP ACLAGLRLCL QRVAAERVAL DLPPSGDSAD SGPISLPTLK
      121 LPLSIELGEV AVGSFLLDGN QQVAELKLAA HWLADGLHID SLTARGFGLD LALQGRLQPS
      181 GDWPLQAEAT LGLPAPEGKP WKLAVQVGGE LQQALTLKGR SSGYLDGSLE GQLQALAENL
      241 PARLLIRADG FKGAAGLPET LTLNAIQLDA GGDLKSGYLI RGGASLPGEG GAVALSLDGR
      301 VDAQGADIRQ LRLDAGGEQR LELVGRLDWR ESLAADATLD WKDFPWLRLY PLAEPPPVTL
      361 KTFKAEVHYQ DQRYLGNFSA AASGPAGDFT LASPVSGDLV QLNLPSLQLR AGQGQAEGRV
      421 TLRFDNGVAW DTALQLSELN PAYWVAELPG SLAGPLRSQG SVRDERLALG VDLDVKGRLR
      481 GQPALFQARA EGEGQRWTLG NLDLRLGDNK VQGSGALDQR LQGRLDIALN RLGQLWPQLF
      541 GRLDGRLDLA GSLAAPQGRL NLKGQQIAYA EQRIAGLDLQ ANLDARQNGT LALVASGLRS
      601 GETDLGLFKA NARGDQRRQQ LELDLQGALL KLGLAFDGQL ERGNWRGRLA RGELSSGGQD
      661 WKLQQPARLE RLADGKVNFG AHCWVSGAAS LCGGEQRLLP EPRLRYTLRD FPLDSLKQWF
      721 PEDFAWQGKL NGDLQLDVPA RGPSGVVSLD AGSGTLRLRD QGQWVDVGYD SLRLESRLAP
      781 NRVDTSLDFR GPKLGELRVQ AQIDPRPASK PLSGEFSLAG LDLSVARPFV PMVEKLQGRL
      841 NGSGRLSGGL LAPRVDGRVT LSDGNIGGGE LPTSFENLSL DARIAGESLE LGGGWRSGRY
      901 GQGSLSGNLS WGEALNVALN IRGNRLPVVV DPYAQLEVEP DLKIGMAGQE LAISGKVLVP
      961 RGDITIRQLP PSTVKVSDDA VIVGSEQPEQ QPLKMKMDID VEVGQDKLAF SGFGLSAELA
     1021 GHLHIGDNLD TRGELNLNKG RYRAYGQRLT IRRARLFFAG PIDQPYLDIE AIRRVDDVVA
     1081 GLRLTGSAEQ PTSAVFSEPA MSQEQALSYL VLGRPMSTGE DSNMLGEAAL ALGLAGSAPL
     1141 TGEIAKQLGI QDFQLDTEGT GNSTSVVASG NITDKLSLRY GVGVFEPANT IALRYQLTKR
     1201 LYLEAASGLA SSLDLFFKRD F
//