LOCUS       QOD47896.1              1043 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa multidrug efflux RND transporter
            permease subunit MuxB protein.
ACCESSION   CP058257-2703
PROTEIN_ID  QOD47896.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="muxB"
                     /locus_tag="HWH41_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_251217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNPSRPFILR PVATTLLMVA ILLSGLIAYR FLPISALPEV DYPTIQVVTL YPGASPEIMT
       61 SSITAPLENQ LGQIPGLNEM SSSSSGGASV ITLQFSLQSN LDVAEQEVQA AINAAQSLLP
      121 NDLPNQPVFS KVNPADAPIL TLAVMSDGMP LPQIQDLVDT RLAQKISQIS GVGLVSISGG
      181 QRPAVRVRAN PTALAAAGLS LEDLRSTVTS NNLNGPKGSF DGPTRASTLD ANDQLRSADA
      241 YRDLIIAYKN GSPLRIRDVA SVEDDAENVR LAAWANNLPA VVLNIQRQPG ANVIEVVDRI
      301 KALLPQLQST LPGNLDVQVL TDRTTTIRAS VKDVQFELAL AVALVVMVTF LFLRNVYATL
      361 IPSFAVPLSL IGTFGVMYLS GFSINNLTLM ALTIATGFVV DDAIVMVENI ARYLEQGDSP
      421 LEAALKGSKQ IGFTIISLTF SLIAVLIPLL FMGDVAGRLF REFAITLAVA ILISGFVSLT
      481 LTPMLSAKLL RHIDEDQQGR FARAAGRVID GLIAQYAKAL RVVLRHQPLT LLVAIATLAL
      541 TALLYLAMPK GFFPVQDTGV IQGVAEAPQS ISFQAMSERQ RALAEVVLKD PAVASLSSYI
      601 GVDGSNPTLN TGRLLINLKP HSERDVTASE VIQRLQPELD HLPGIKLYMQ PVQDLTIEDR
      661 VARTQYQFTL QDADPDVLAE WVPKLVARLQ ELPQLADVAS DWQDKGLQAY LNIDRDTASR
      721 LGVKLSDIDS VLYNAFGQRL ISTIFTQATQ YRVVLEVAPQ FQLGPQALEQ LYVPSSDGTQ
      781 VRLSSLAKVE ERHTLLAINH IAQFPSATLS FNLAKGYSLG EAVEAIRGVE ASLELPLSMQ
      841 GSFRGAALAF EASLSNTLLL ILASVVTMYI VLGILYESFI HPVTILSTLP SAGVGALLAL
      901 MLAGQEIGIV AIIGIILLIG IVKKNAIMMI DFALDAERNE GKPPHEAIYQ ACLLRFRPIL
      961 MTTMAALLGA LPLMLAGGAG AELRQPLGIT MVGGLLLSQV LTLFTTPVIY LYFDRLARRW
     1021 AAWRKQRGLD LNTEAGFDGD AGR
//