LOCUS QOD47762.1 3107 aa PRT BCT 28-SEP-2020
DEFINITION Pseudomonas aeruginosa amino acid adenylation domain-containing
protein protein.
ACCESSION CP058257-2558
PROTEIN_ID QOD47762.1
SOURCE Pseudomonas aeruginosa
ORGANISM Pseudomonas aeruginosa
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6580692)
AUTHORS Alamri,A.M. and Alnimr,A.M.
TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas
aeruginosa
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6580692)
AUTHORS Alamri,A.M. and Alnimr,A.M.
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: 20-JUN-2020
Assembly Method :: SOAPdenovo v. 1.05
Genome Representation :: Full
Expected Final Version :: Yes
Reference-guided Assembly :: NC_002516.2
Genome Coverage :: 100.0x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 06/29/2020 17:07:23
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 6,083
CDSs (total) :: 6,023
Genes (coding) :: 5,942
CDSs (with protein) :: 5,942
Genes (RNA) :: 60
tRNAs :: 56
ncRNAs :: 4
Pseudo Genes (total) :: 81
CDSs (without protein) :: 81
Pseudo Genes (ambiguous residues) :: 6 of 81
Pseudo Genes (frameshifted) :: 33 of 81
Pseudo Genes (incomplete) :: 47 of 81
Pseudo Genes (internal stop) :: 7 of 81
Pseudo Genes (multiple problems) :: 10 of 81
CRISPR Arrays :: 3
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa"
/mol_type="genomic DNA"
/strain="PA179"
/isolation_source="blood"
/host="Homo sapiens"
/db_xref="taxon:287"
/country="Saudi Arabia: Khobar"
/lat_lon="26.217192 N 50.197140 E"
/collection_date="2017"
/collected_by="Aisha Alamri"
protein /locus_tag="HWH41_12870"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007956356.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MDMSVALRVA RRFITLPLDK RKLYLAKMQE EGVTPANLPI PEVASAFERI PLSYAQERQW
61 FLWQMDPQSA AYNIPSALRL RGELDVEALS ASLGAIVERH QSLRTVFVED EQLDGFRQQV
121 LASVDVPVPV TLAGDDDAQA QIRAFVESET QQPFDLRNGP LLRARLLRLA ADDHVLTLTI
181 HHVAADGWSM RVLVEELIAL YGARRQGIEA TLPDLPIQYA DYAIWQRHWL EAGERERQLE
241 YWMARLGGGQ SVLELPTDRQ RPALPSYRGA RHELQLPQAL GRQLQALAQR EGTTLFMLLL
301 ASFQALLHRY SGQDEIRVGV PVANRNRVET ERLIGFFVNT QVLRADLDAQ MPFLDLLQQT
361 RVAALGAQSH QDLPFEQLVE ALQPERSLSH SPLFQAMYNH QNLGSAGRQS LAAQLPGLSV
421 EDLSWGAHSA QFDLTLDTYE SEQGVHAEFT YATDLFEAAT VERLARHWRN LLEAVVAEPR
481 RRLGDLPLLD AEERATLLQR SRLPASEYPA GQGVHRLFEA QAGLTPDAPA LLFGEERLSY
541 AELNALANRL AWRLREEGVG SDVLVGIALE RGVPMVVALL AVLKAGGAYV PLDPQYPADR
601 LQYMIDDSGL RLLLSQQSVL ARLPQSDGLQ SLLLDDLERL VHGYPAENPD LPEAPDSLCY
661 AIYTSGSTGQ PKGVMVRHRA LTNFVCSIAR QPGMLARDRL LSVTTFSFDI FGLELYVPLA
721 RGASVLLASR EQAQDPEALL DLVERQGVTV LQATPATWRM LCDSERVDLL RGYTLLCGGE
781 ALAEDLAARM RGLSASTWNL YGPTETTIWS ARFRLGEEAR PFLGGPLENT ALYILDSEMN
841 PCPPGVAGEL LIGGDGLARG YHRRPGLTAE RFLPDPFAAD GSRLYRTGDL ARYRADGIIE
901 YLGRIDHQVK IRGFRIELGE IETRLLEQDS VREAVVVAQP GVAGPTLVAY LVPTEAALVG
961 AESARQQELR SALKNSLLAV LPDYMVPAHM LLLENLPLTP NGKINRKALP LPDASAVRDA
1021 HVAPEGELER AMAAIWSEVL KLGHIGRDDN FFELGGHSLL VTQVVSRVRR RLDLQVPLRT
1081 LFEHSTLRAY AQAVAQLAPA AQGGIVRCAR DASPQPSFAQ ERQWFIWRLD PHSAAYNIPV
1141 ALRLKGPLRR DALQGALDLL VQRHETLRTT FVEHDGAPRQ VIHPTLPIAI EERRPPVAGE
1201 DLKGLVETEA HRPFDLQRGP LLRVLLLPLA TDECVLVLTL HHIIADGWSM QVLVDELIRV
1261 YAALRHDQPP ALAELPIQYA DFAAWQRQWM DGGERERQLD YWVSRLGGEQ PLLELPSDRP
1321 RPQQQSHRGR RIAIPLPAEL AEALRRLAQA EQGTLFMLLL ASFQALLHRY SGQNDIRVGV
1381 PIANRNREET EGLIGFFVNT QVLRAELDGQ LPFRELLRQV RQAVVEAQGH QDLPFEQLVD
1441 ALQPERSLSH APLFQVMYNH QRDDHRGSRF ATLGELEVED LAWDVQTAQF DLTLDTYESS
1501 NGLLAELTYA TDLFDASSAE RIAGHWLNLL QSIVARPEAR IAELKLLDEA EARADLLQWN
1561 PGPQDFTPAS CLHRLIERQA AERPRATAVV YGERALDYGE LNLRANRLAH RLIELGVGPD
1621 VLVGLAAERS LEMIVGLLAI LKAGGAYVPL DPRYPSDRLG YMIEDSGIRL LLTQRAARER
1681 LPLGEGLPCL LLDAEHEWAG YPESDPQSAV GVDNLAYVIY TSGSTGKPKG TLLPHGNVLR
1741 LFDATRHWFG FSADDAWSLF HSYAFDFSVW EIFGALLHGG RLVIVPHETS RSPEDFLRLL
1801 CRERVTVLNQ TPSAFKQLMQ VACAGQEVPP LALRHVVFGG EALEVQALRP WFERFGDRAP
1861 RLVNMYGITE TTVHVTYRPL SLADLDGGAA SPIGEPIPDL SWYLLDAGLN PVPRGCIGEL
1921 YVGGAGLARG YLNRPELSCT RFVADPFSTT GGRLYRTGDL ARYRCDGVVE YVGRIDHQVK
1981 IRGFRIELGE IEARLLAQPG VAEAVVLPHE GPGATQLVGY VVTQAAPSDP AALRDTLRQA
2041 LKASLPEHMV PAHLLFLERL PLTANGKLDR RALPAPDASR LQQDYAAPRS ELEQRLAAIW
2101 ADVLKLGRVG LDDNFFELGG DSIISIQVVS RARQAGIRLA PRDLFLHQTI RGLAGVAVEG
2161 RGLASAEQGP ISGSTPLLPI QQMFFELDIP RRQHWNQSVL LEPGQALDGT LLETALQALL
2221 AHHDALRLGF RLEDGTWCAE HRAVEAGEAL LWQQSVADGQ ALEALAEQAQ RSLDLGRGPL
2281 LRALLATLGD GSQRLLLVIH HLAVDGVSWR ILLEDLQTAY RQLQAGQAVA LPAKTSAFKA
2341 WAERLQAHAR DGGLEGERGY WLAQLEGVST ELPCDDREGA QSVRHVRSAR TELTEEATRR
2401 LLQEAPAAYR TQVNDLLLTA LARVIGRWTG QADTLIQLEG HGREELFEDI DLTRTVGWFT
2461 SLFPLRLSPV AELGASIKRI KEQLRAIPHK GLGFGALRYL GSAEDRAALA ALPSPRITFN
2521 YLGQFDGSFS ADSSALFRPS ADAAGSERDS DAPLDNWLSL NGQVYAGRLG IDWSFSAARF
2581 SEASILRLAD AYRDELLALI EHCCAADVEG VTPSDFPLAG LDQRQLDALP LAASEVEDLY
2641 PLSPMQQGML FHSLYQQNSG DYINQMRLDV EGLDPQRFRE AWQAALDAHE VLRSGFLWQG
2701 ALEKPLQLVR KRVEVPFSVH DWRDRADLAE ALDALAAGEA GLGFELAEAP LLRLVLVRTG
2761 ERRHHLIYTN HHILMDGWSN SQLLGEVLQR YRGETPSRSD GRYRDYIAWL QRQDAGRTEA
2821 FWKQRLQRLG EPTLLVPAFA HGVRGAEGHA DRYRQLDVTT SQRLAEFARE QKVTLNTLVQ
2881 AAWLILLQRY TGQDTVAFGA TVSGRPAELR GIEEQIGLFI NTLPVVASPC PEQPLGDWLQ
2941 AVQGENLALR EFEHTPLYDI QRWAGQVGEA LFDNILVFEN YPVSAALAEE TPTDMRIDAL
3001 SNQEQTHYPL TLLVSAGETL ELHYSYSRQA FDEAAIECLA ERLERLLLGM CENPGASLGE
3061 LDSLAAAERY QLLEGWNATA AEYPLQRGVH RLFEEQVERT PTAPALA
//