LOCUS QOD47522.1 812 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa glycogen/starch/alpha-glucan phosphorylase protein. ACCESSION CP058257-2301 PROTEIN_ID QOD47522.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_11585" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_250834.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPDSQDQTPS AVQTLKASIL AKLRYSVGRD PSTACPHDWF EAVALAVRDH IIDHWEEATP 61 QGEAPARKRV YYLSLEFLIG RLLLDNLGNL GLLEETRQAL AELGVDLQRI VALEPDAALG 121 NGGLGRLAAC FMESMASLDI PAHGYGIRYE HGLFRQVLTD GWQQEQTETW LDFGNPWEFE 181 RPEVSYYIDF GGSVQVDSEH SGRAIWRPDE RIRAIAYDTP IVGWRRASVN TLRLWRARAE 241 EDLQLDRFNA GDHIGAVVDV VKAESISRVL YPADSTEAGQ ELRLRQEYFF VSASLQDLLD 301 RHLRHHHDLR SLPEQVAIQL NDTHPAIAVA ELMRQLVDVH QLAWPDAWAL SVATLSYTNH 361 TLLPEALESW PVALMERLLP RHMQIIYLIN AFHIDALRAQ DIHDFDLLRS VSLIEEGHGR 421 RVRMGNLAFL GSHQINGVSA LHTELMRETV FHDLHRLYPQ RISNKTNGVS FRRWLFQANP 481 GLTELLVETL GADLLDTPER RLPDLEEHVE DARLRARFAE QRRQNKTALA RLVLDSLGVA 541 IEPEALFDVH IKRIHEYKRQ LLNLLHTVAL YQEIRNDPTA DRVPRVKIFA GKAAASYHQA 601 KLIIKLANDI ARTINDDPTV RGLLKLVFLP NYNVSLAEAI IPAADLSEQI STAGLEASGT 661 SNMKFALNGA LTIGTLDGAN VEMSQRIGLE HMFIFGLSAQ QVEQRRQAGE LEMGGVIAAS 721 PRLEEALEAI RSGLFSADDR SRYEGLVDGL VHDDRFMLCA DFEAYWHAQC RVEEVWREPD 781 RWWRSALLNV ARIGWFSADR TISEYARDIW KL //