LOCUS       QOD47454.1               880 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa TonB-dependent receptor protein.
ACCESSION   CP058257-2230
PROTEIN_ID  QOD47454.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MHRSLHTDPP LGAALLLALQ LAPSSAAAAE GQAPVDPPTV QLQRIEVTGS AIRRVDAETA
       61 VPISVLRAEE LRQQGVTSTE ELIGRLSGNQ GVYNSSRSVG SATGGASFAD LRGIGANKTL
      121 VLLNGRRLAN NAIDGSAVDL NTIPFAAIDR VEVLRDGASA LYGTDAIGGV INFITRKSLN
      181 EGRVDSGYAS PTQDGGGNQR NVSASWGFGE LEEDRFNVFA VANYDKQERL GAKDRGYTYN
      241 YQPGRGLDYS SGTAFPGNWS QGANASNPLA AGGCKGADLI PRNGICRQSL WRYLDLVPET
      301 EKTSVFSRAT GKLADEHNVS LEYFWSRNDN ATQVGPGTLT GLQIDPGTAF YPGNGITPGP
      361 GGFVLDPSRP VEVNWRQSVL GPRLQSSQNT GQRLLLGFDG QFAGWDYDIG ASYNQNKVVD
      421 HIHSGYVDDR AAALGIANGT LNPFGPQTDA GLAYLGSHAL SGDFRTSVGR VKGLDARASR
      481 EIGDWFGAGP AALALGGEFR KEAFHQDIQD FAGNVQSLGV DPAATVSGER NLKAQYAELN
      541 VPVLDSLELS AAIRHDKYSD FGSTTNPKYS FRFQPFRQLV LRGAYSEGFR APSLYELYNP
      601 TFTTYTSANY DDPRLCAGGQ PSQGGIANRD CAQQFYNATG GNTDLRPETA RNVTLGLVYQ
      661 PLRDLSVGLD FWWIRIANQI AEFPEAAIFA DPQAYAGRIV RKADGSIDHV VTGLANLGKV
      721 KTSGVDLSLD YRFPASRYGQ FGLDLQGTYV SRYDFQQQIG GQYLDNVGDF QGVGVIARWK
      781 HVANATWSRD AWQATLSNRY TSGYNDYDRA SHGRVGSWNL WDLAGSYRLS HALGLTLGVK
      841 NLFDREPPFS NQTYTFQSGY DPRYTDPYGR ILFGRLSYSF
//