LOCUS QOD47297.1 546 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa hypothetical protein protein. ACCESSION CP058257-2066 PROTEIN_ID QOD47297.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_10410" /inference="COORDINATES: protein motif:HMM:NF015368.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTAVDLLLVA TLLAALLAWW IPALPGRRGL LALASTLALG AGLYAVWDDR WQAGVGAFAG 61 FSLLLGACLR RKPVRGLPFR TGSLYGLLVL LAIAALYLFP VAPLPAPSGP YAVGVRDFEL 121 DDPSRPGLLG APAGQPRRLL VRAWYPARPI AGAAPRHYFD PDEARSTARG FGEILGFPPL 181 LAYLKHLRTN SYPDAPLRDD SARLPVVFYS HGYSAFAGGN WTLMEELASH GYAVYAIQHS 241 GDASPTRLPD GTLLPMDPGL VEHLRRAAHD GLPQAMRQGY VSDDLDQRLD GQLHTALDLP 301 APANRAVNLS APVWLADRLF VHDRLQAGEV PDRVADLVAA SDFAHTGEMG MSFGGSTTGA 361 VCMVDRRCAA AVNLDGGDFD FAPFDSDFPA PLLMLHADLG NFYRLFGIEP PARPRSFNDF 421 SYERFEHAGQ RQDIHRLILR DSAHAGLTDN PLFIRRPLRD GLLGSAPTEV LIQAPNALVL 481 GFFDHYLRGR ANDFPQAQMA RFPAWLTRYD NSAVRDWWLA KPEAQRLALR QRIDEMKRRK 541 TGLDLP //