LOCUS QOD45995.1 1245 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa EAL domain-containing protein protein. ACCESSION CP058257-701 PROTEIN_ID QOD45995.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_03515" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_249266.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MQRLQAVLLL CLACCWPGLA GALTLTPEER AWLAEHPSIR LGVDTSWPPF EFRDEQGRYQ 61 GLAAGYVGLL QERLGVSLTP VEPKTWTQVL EQAKDGRLDL LPGIMATPER QEYLSFTRPY 121 LDFPIIILAR KNGPMPKRID ELYGLKVAVV DHYAPHELLI AQHPDLTLLP LPSVAAALQA 181 LATGQADAFV GDFASSVWNL RQLKLNGLEI SGETPYRYQL AMAVPRGQPI LAGIIDKVLA 241 DLSAEEIERL QAPWVGGLLD RRPAWREMAT YGLPIVLLIL VSVAILLAMN RRLRREVSRR 301 RQLERELRDS EQHYRGLVES LNAIAWEMRL EENRFTYVSP HAERLLGYPL GEWLQPGFWQ 361 RTLHPMDAEY AIHYCMSESQ AGRDHSFDYR MLAADGRVVW IRDLVTPIAQ GRDLLLRGLM 421 IDITEAKLTE QAMRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNNTFEQ QIGIAADDAI 481 GKTATELGIW ALPGLGPQVL EKLGHGNLTN LEVPLRRRNG STFSALLSAQ HVALDQTPAL 541 VVVIRDITHL VETQELLRIS EEKFANAFHA YPDGLLISRL EDGTLIDVNE GFTRLTGYRR 601 DEVISRSTLE LGLWVDTEDR KRLISLVRHH TLTQGFTAPV RDRNGGIRQC EMSAHRISID 661 GEDCVLTIAR DITERQLMQE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE 721 QEALGRSPSL LSSGQHDSSF YLAMWNQLER DGHWQGEIWN RRKTGELYPE WLTISAVHNP 781 QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFESRLNHAL DEAREESRPG 841 AVLFIDLDRF KHINDSLGHP IGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ 901 ESDAEHVARK LLNAFTAPFQ ADGHEFFVSA SVGIALFPKD GDDAPTLVKN ADAAMYRAKS 961 RGRSRIEYYT RELTYLATER MALETELRRA LERDELQLYY QPKLSLESGL LVGAEALVRW 1021 YHPLFGEISP ERFIPLAEDC GLILPLGDWV LEHACQQMGE WQKLHAPFGP LSVNLAGAQL 1081 GQPQLIERLE QLLEQSGLEP SRLQLEITES FIMNQTEEAL AVLHGLKRLG VQLAIDDFGT 1141 GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ 1201 QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV //