LOCUS QOD45710.1 461 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa sodium:solute symporter protein. ACCESSION CP058257-406 PROTEIN_ID QOD45710.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_02035" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248978.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MLLDYLIMLV YALAMLGLGW YGMRKAKSQS DFLVAGRRLG PGLYLGTMAA VVLGGASTIG 61 TVKLGYQFGL SGLWLVFMLG LGIIVLSLVF SRQIARLRVF TVTQVLEQRY QASSRLIGGV 121 VMVAYDLMVA VTATIAIGSV TEVVFGIPRI PAILCGGGIV IVYSVIGGMW SLTLTDIIQF 181 VIKTVGIFLV LLPLSIDGAG GLARMQEVLP AGFFDLGHIG LDTILTYFLL YFFGALIGQD 241 IWQRVFTARS ETVVRYAGLG AGVYCMLYGA ACALIGAAAR VLLPDLAVPE NAYAEITREV 301 LAPGLRGLVV AAALSAIMST ASGCLLAAAT VLQEDIYARF LRPGTTSDIR LSRCITLLMG 361 VAMLVLACLV NDVIAALSIA YNLLVGGLLV PIVGALLWRR ASPQGAIASI VAGCLAVIAC 421 MARDGLLANS PIVYGLLASL ATFVAVSLAT RPAASLRAQP E //