LOCUS QOD45600.1 790 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa TonB-dependent receptor protein. ACCESSION CP058257-284 PROTEIN_ID QOD45600.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_01420" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248882.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKYHYRLPLR RTPPGGSDYA LALLLALGGA LPASAADAPA PAEEAPPLAG SAPAKADTAL 61 GKVTVTARRR EEDSQKVPTP ITVLGGETLE AQRISRVQDL QQVLPSVNVA YIHARQSSVA 121 VRGIGNNPAS DGLEGSAGIY LDNVYLGRPG MAVFDLLDIE QLELLRGPQG TLFGKNTTAG 181 VLNISTRAPT FTTERTVEVS GGQDGYFQGR GTVSGPLGET LAGRLSAYRT RDDGYIKNIH 241 DDNYLNGGER QGARGQLLFE PNEDFSLRWI ADYNEEDSSN GSMVVYGAAE RFWQRAALVG 301 ASPLRDPQRR KVNINGRQHV SVHQGGSSLE ANWNLAGGYR LTSISAYRYW HFTPANDEQL 361 NVSAINDTGV EVHDRQFSQE IRLASPTGGA FDYVVGAYAF RQNLGNKTFT SYGPLADLYL 421 LGANLGALND TYSKANGKIE TDSFALFAQG TWHLSERLDF TAGLRGTYEE KNAKVERFAP 481 LGGAAVGGVG AAVRNGQLGA YDSGDLSQYN FAPSALLSLS YQFSDDLLGY ASLSHGEKSG 541 GVNLAVGSAP SAGADSLLVG PERANDAELG LKSTLFDRRL LLNANLFWTG IHGYQATTLY 601 QAPGSTQLVQ VLANAGSVRS RGLEFEATAL PLRGLTLNFN GSYNDVTYLS FKDAPCPAEV 661 STRPGAPSSC DLSGQRVVGA SKWIANLNGE YQWRLDDRFQ PYVSASYAYR SAAEGTLDNS 721 DLSKIDGYAL VNLAAGLRSD LGDGQLDTSV WLKNAFDKDY YLSAFASING SYTASVGQPR 781 TLGVSLRYDF //