LOCUS QOD45564.1 795 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa TonB-dependent receptor protein. ACCESSION CP058257-246 PROTEIN_ID QOD45564.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_01230" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248841.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTPFPRFALR TLPALFLSLG CLAATAQAAE AVRYRFSQAA APLAQALNAF SRASGQTLLY 61 TAELPPQATA PALHGSLDAE EALQRLLQGS GLRARRIDER TLTLEPIPAS GALNLDATTV 121 SAAAPAQGYR PAANASISRG DAPLLEIPQA ISVVPAQALQ DQRPRNLDDA LGNISGITQA 181 NTLGGTQDAV MKRGFGDNRD GSIMRDGMPS VQGRNFTATA DHVEVLKGPA SLLYGIQDPG 241 GVVNVVSKKP QLQQANALTL RGSAYAHGRN GSGGQLDSTG PLGDSGLAYR MILDHEDEDY 301 WRDFGKSRET LVAPSLAWYG EDTTVNLSYE HREFTTPFDR GTAIDPRTNR PLDIPRSRRL 361 DEPFNITEGR SELTRLDLER QLDDTWKAHF GYGYSRETYD DNQARVMAVN ADGTLTRRMD 421 GTHGAVSSDS FATLGLSGTL QLAGMQHDLQ FGMDHEKRKI FRADLLRDSK TSRFDYLDPV 481 YGQVVPSTRV VAGDSDQTDK LRSDSLYFQD SIHLDERWIL VGGARYQIYD QLAGRGRPFN 541 ANTDINGQKW VPRGGLVYRL SDEVSLYGSY TRSFKPNSTI APLSTGETID SAILPEEATS 601 WELGAKLDVP GRLSGTLALF DIRKKNVLVN ELDGAGNSSV RAAGRVRSRG LELDLTGQLS 661 ERWSLIGSYA WLAAEVTEDP TLEGKRLQNV ARNTASLSAV YELGQLFGGD RLRLGGGARY 721 VGKRPGDPAN SFDLPSYTVA DAFASYDTRF GGHGVKFQLN VKNLFDRTYY PSSANRLYVA 781 MGEPRQFQLS TTVEF //