LOCUS QOD45560.1 365 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa BMP family ABC transporter substrate- binding protein protein. ACCESSION CP058257-241 PROTEIN_ID QOD45560.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_01205" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248836.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKHRRTQSHM SVLRRLAAVL GLGACALAAE AAEPLKIGFV YVGPVGDHGW TYQHELGRRE 61 LVEHFGDKVK TSFVENVAEG ADAERVIRNL AKDGYGLVFT TSFGYMNPTA KVARQFPKVT 121 FEHATGYKRD RNLGTYLSRS YEGRYVGGFL AAKMTRSHKI GYIASFPIPE VIRDINAIQL 181 ALDKYDPRAE LKVMWVSTWF DPGKEADAAN ALIDQGVDVV FQHTDSPAPI QAAERRGVYA 241 VGYASDMQHF GPKTVLTSIV NDWGPHYIRS AQAVMDGTWK SEDFWGGLAE STVVLPLNQE 301 VLPAPVREEA GRLIESIRSG AFHPFTGPIR DQSGKERFAA GVSATNADLA SMNYYVEGIK 361 ADLPK //