LOCUS QOD45535.1 449 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa C4-dicarboxylate transporter DctA protein. ACCESSION CP058257-214 PROTEIN_ID QOD45535.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_01070" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248809.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 METPAMFIKR CSRSIFLQVV IGLVIGVICG VGIPDLAVQM KPLGDGFIKL IKMLIALIVF 61 CVVVNGISGA GDLKKVGRIG LKSVIYFEIL TTIALVLGLV VAYSLGLGSG ANIHLNELPA 121 GDVALYTGRT QEIHGPVAFL MGLIPTSVFS AFAENDILQV LLFSVLFGSA LNLVGEQASG 181 VARLINEFSH IVFRIMGMIV RLAPLGVFGA VAFTTARYGV DSLSHLGALV LVFYATCLVF 241 VMAVLGSVLR LSGVRMLPFL RYFREELMIV MGTASSDAVL PQVMRKLEHM GIRSSTVGLV 301 IPTGYSFNLD GFSIYLTLAV VFIAHVTGTP LAMTDLVTIL LVSLVTSKGA HGIPGSALVI 361 LAATLTAVPA IPVAGLVLVL SVDWFMGIGR ALTNLIGNCV ATVTIARWEN DIDMPRAQAI 421 LDGRLEAPAK ADGEPLKRSA VAGEGKLHG //