LOCUS       QOD45350.1              1626 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa DEAD/DEAH box helicase protein.
ACCESSION   CP058257-5
PROTEIN_ID  QOD45350.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSALSALLHT FRSASVTERE KGTYFEELIC AYLRNEATYR DLYDKVWTYA DWAKEQGLSG
       61 KDAGIDLVAR TQGTGEYHAI QCKLYAEDYK VQKKDIDSFF TASGKAPFSH RVIVTTTNNW
      121 SEHAEDALQG QQPPVSKIDL QALEDSQVDW AKYQPNQAVV LKARKQLRDH QQTALNAVVA
      181 GLKDAERGKL IMACGTGKTF TSLKIAEQQA GKGKRVLFLV PSLSLLSQTL TEWTQESATL
      241 LHSFAVCSDS DVGKKRKAED DAVQVFTHEL RYPATTKADR LASEMLKRHD AEHMSVVFST
      301 YHSIDVISRA QADHGLPAFD LVICDEAHRT TGATFGDDDE SNFVRIHDGD YIRAAKRLYM
      361 TATPRIYGDS AKIKAESGEV TLCSMDDEAL YGKELFVINF SEAVQRGLLT DYKVLVLTVE
      421 ESTISRRLQD MLKDENNQLK VDDAAKIVGC WKALAKQGLH EQLIGDDEPM KRAVAFCQVI
      481 SPNYKGTKHK VSSINIASMF QAVVEAYQES EEIDEASRLI CEAEHVDGGM NASAKEAKLN
      541 WLKEEPLANT CRILSNVRCL SEGVDVPALD AVLFLTPRNS QVDVVQSVGR VMRNAPGKKR
      601 GYVVLPVVIP AGMEPHEALN DNQTYKVVWQ VLQALRSHDD SFDAMVNKLD LIGSDPRKME
      661 VIAITDKAEK NAKKATGTTN GKAGKGQYGI GSKNHDVPGQ MTQQAELTYE VGEIEKAIYA
      721 KIVEKCGNRH HWEDWANDIA KIARTHIDRI QGILENPANT QEQAAFNVFA AELRDDLNDS
      781 ISDGEIVEML AQHLVTKPVF DALFDEYSFA SHNPMSKAMQ GVLDALHEHH LAKEADTLEK
      841 FYASVRQRAA GIDNAQGKQK IIVELYDKFF RNAFPKMTER LGIVYTPVEV VDFILHSVNH
      901 LLQQEFGQTL GSKGVHIIDP FTGTGTFITR LIQSGLIKPE ELPHKYKHEI HANELVLLAY
      961 YIAAINIEAA YHGEVIDEYT PFEGICLTDT FQMYEKEDLI DEVLVDNSAR RKRQKALDIR
     1021 VIVGNPPYSV GQKSENDNND NVDYPKLDAD IRATYAARSS ATLAKGLYDS YIRAIRWASN
     1081 RIGDTGIIGF VTNAGFLDAN TTDGLRKCLA DEFSSLYVFH LRGNQRTSGE TSRKEGGKIF
     1141 GSGSRAPIAI SLLVKNPAAQ GHGQIYFHDI GDYLSREEKL EKVAGYASVA GIEQWQRITP
     1201 DEHGDWLKQR DNSFNRFIVL GEKKSDAPKL FENFSLGVVT NRDAWAYNAS QSKLATNMTS
     1261 MIGFYNGEVE RFNAKYSGLD TKARQAQVDG FIDTDPTRIS WTHNVKQDLV RNHIYAFESG
     1321 NMVSSLYRPF TKQWLYYNRR FNERVYQMPR IFPDAGTENL VIGVSAAGEK VAFSALISRH
     1381 VPSLHFVDIE GSQCFPLYLY DEAAQASDSD LFAEPIDGGL RRRDAVTDAG LAHFQSAYPG
     1441 ESLSKEDLFY YVYGILHSPD YRERFADNLS KELPRIPAVK KAADFWAFSQ AGRALADLHL
     1501 NYETVEPYPL TIEAKSPLTG ADYRVEKMKF AKKGDKSTVI YNHRITLKDI PRAAWDYVVN
     1561 GKAALDWVME RQAVRTDKAS GIVNDANDWA IETMGNPKYP LELFQRVVTV SLETTKIVKG
     1621 LPPLDI
//