LOCUS QLY34538.1 379 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis XRE family transcriptional regulator protein. ACCESSION CP059399-4048 PROTEIN_ID QLY34538.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_20500" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019047531.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRGKSSHNLP TDSTLLRNWR RWESGESRPD DFYAPIIAAA FDTVTAAFFP KARPNRDDEL 61 LSATGMDTLE FIGRLRMSDV SSATLDAIRI TADRLCSEYP CCDPHELHAE GTAWLRRITS 121 LLDGRLTLAQ HREVLVLAGW VALLVGCVDY DLGWRTAAEA TRRAALSLGQ EAEHAEIIGW 181 GAEMAAWFAL TQANYRGAIE AAEGAYASTG NLGVGVQLAA QRAKAWARLG DRREVEKALS 241 QGRSILDKLD HPANVDNHFV VDPQKFDFYA MDCCRVAGDD REAENYARQV ILSATRPDGS 301 IRKPMRVSEA HLTLAVVAVR ERNLELALDE GLRAFAGKRR SLPSLMWIAG ETAREMIERF 361 PGDPRTRSYL DQLRALAAG //