LOCUS QLY34292.1 794 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis nitrate- and nitrite sensing domain- containing protein protein. ACCESSION CP059399-2244 PROTEIN_ID QLY34292.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_11380" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019046145.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MVLISSVTLL VIGGGAAVYL VQNARESQQW AELASSTTGP AILMVSAFEE ERRLSLLHLA 61 GDTATVPELV AARAKSDAAL AAVRAKGDAA RELNPDGKAS DIEGYNKLFS MVPTLRAGVD 121 ALQMPADQVF TFFTQVIGTI ISASMLAARV APDAEIAIEL GYAVEQLRAA EALSQADTIG 181 AVALTMGEMS AAQFLEFGRL VGEFRSEVAY SATVLKGIRL EQLQALTNGE AWQQVTAMQD 241 AVLLRGPFTA ETTDSPAKTT GASAKTAERT TAKTPALPLG VAAWQQASGH VKASLQQIWE 301 DQSRDAHVIA REQGAAATRN ASLGGAVVLL IAVLAFVAAL IMANRFIGRM RRLRRDTLEL 361 ADHRMPELIA RLGVGDEKDV SAETAALDFG TDELGQVAEA FNRAHIAAVS AAVAEAKTRA 421 GVNAVFLNIA HRSQVVVHRQ LGLLDRAERE EKDAGQLELL FQLDHLATRA RRNAENLIIL 481 GGEQPGRRWR NPVLLFELVR GAVAESLDYT RIHLGRLPEV RIASHAVADV IHLLSELIDN 541 ATACSPPESQ VSVSGVIVGR GVVVEINDQG LGMSEDEFAE RNAMLANPPD FSVATLPGGS 601 RLGLFVVAKL AGRHGISVKL AESEYGGVRA VVLIPSVLMA SADAPAEPPA ELPDDVRDGL 661 RPLVPDHPYA LRSDRFQALR AAAAPNSAAP QTVGPAHTFG PALHTGPMQR VSRATSPAET 721 AVPAPTGAAA PGTLPGGRPE LPRRNRNAAT TPDPAASTAP RTRSADEARN LMSAIAKGTR 781 QGRQTPPASE RGTP //