LOCUS QLY34169.1 1165 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis error-prone DNA polymerase protein. ACCESSION CP059399-1298 PROTEIN_ID QLY34169.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_06580" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013416827.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MERVLSGRPG RVEPEHPGDG SDSPAWSRTR GEYRAAPVER PAGPVVPYAE LHAHSAYSFL 61 DGASQPEEMV EEAVRLGLEA LAITDHDGFY GVVRFAEAAR EWGMPTIFGA ELSLGTAARA 121 GKHLVRRGAA RPPGGSGTPP ERRNGSRRQD EPVRMAGRRG AAPMGGAWPS EPDSGWGDSA 181 PRTGAPDPVG PHLLVLARGQ EGYRRLSREM AAAHMVAGEK GILRYDLDRL TEAAGGHWHI 241 LTGCRKGHVR QALQQGDAAA EAALRELVER FGRDHVSVEL THHGIPEDDE RNARLVALAD 301 RLGLPVLATT GAHFAAPPQR RRAMALAAIR ARSSLDDMAG WLAPTGGAHL RSGAEMARLF 361 AACPEAVANA VALARDCAFD LRLIAPRLPP FDVPDGHDEN SWLRELTYQG AARRYGPRAG 421 NPKAYDQLEH ELRVIEKLGF PGYFLVVHDI VSFCRDNDIL CQGRGSAANS AVCYAIGITN 481 VDPVANKLLF ERFLSPERDG PPDIDVDIES DRREEAIQHV YAKYGRQYAA QVANVITYRG 541 RSSVRDAARA LGFSTGQQDA WSKQTTSWHF TVGGPRDNTG GGNAGMVSRW TGVTEEKHTD 601 IPREVLALAG ELEGLPRHLG IHSGGMVICD RPIADVCPTE WARMPGRSVL QWDKDDCASA 661 GLVKFDLLGL GMLSALHYMI DLVREHKGET VELHQLDLSE QAVYDMLCRA DSVGVFQVES 721 RAQMATLPRL KPRNFYDLVV EVALIRPGPI QGGSVHPYIR RRNGKEKAVY DHPALENSLE 781 RTLGVPLFQE QLMQMAVDVA GFTPAEADQL RRAMGSKRSP EKMNRLRERF YTGMRELHGI 841 TGEVADRIYE KVYAFANFGF PESHSQSFAS IVFYSSWFKL HHPAAFCAGL LRAQPMGFYS 901 PQSLVADARR HGVAVHGPDI NHSLAEATLE ARGTQIRLGL ASIRQLGTDL AERIVAARES 961 GPYTSFVDLT GRVELTVPQA EALATAGALG SLGITRRQAL WAAGAAAAER HDRIPGTGAA 1021 TAAPALPGMS DLELAAADVW ATGISPDSYP TEFLRDRLDA LGVVPASGLL DIPDGTRVLV 1081 GGAVTHRQRP ATAAGVTFLN LEDETGMVNV VCSVGLWARY RRLAQSAPAL LIRGRVQNAE 1141 GAVTVVADHL QRLDLRITAR SRDFR //