LOCUS QLY34160.1 489 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis AAA family ATPase protein. ACCESSION CP059399-1206 PROTEIN_ID QLY34160.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_06120" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011207362.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSTPPSNFAA PGSHGNPPQG SPWPPSAGAP QSDASAPQYG TGAMQGPGGP GAYAPAPDQG 61 MPGQNTPQGN PWQHGSEQAG QSAWGAPGEG ASQGNSWPQG GEQGAAQASW GAPGEGAPQG 121 NSWPHGGEQA GQGAWGAQGQ GAPVQGGYPQ GGNAGYGQPQ WAGQGANGAA GQPGWGQPGQ 181 PGPSLDEVPV RRAKKAAGSG WRKAVHHISG GAINPGMSAE ELRLQELVAR IRQPVRGDYR 241 IAVLSLKGGV GKTTTTMGLG SIFASVRGDR VIAVDANPDF GTLSQRVPLQ TRSTVRDLLL 301 DPNIQRYSDV RRHTSQGGSR LEVLASERDP AASEAFSEEE YRAVARILQR FYNIILTDCG 361 TGLMHSAMAG VLDLAHSLVL ISSSAIDGAR SAAATLDWLS LHGHDHLVRN AVVVINLPRP 421 GAPNVGINQL RDYFLSRCRA VHIIPYDAHL GEGAEIDLQR LHKNTKRSLV ELAATVADDF 481 ASDHRRYRG //