LOCUS QLY33767.1 473 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis hypothetical protein protein. ACCESSION CP059399-3430 PROTEIN_ID QLY33767.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_17390" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /transl_table=11 BEGIN 1 MSEMEGPGTY PHPYEPLRPA DGPRPGPAPG PYPGGSYQPG PPYPPGPAAA PGSTGGNSFP 61 GGPAPSGTPG AGYSPGGINP GPPSHPGMPG LPAGQVAPIG QGTPGNSPGS AALGRLAGAL 121 LLSIAALGVP ASFLPLVEFD EAFLDIQMSL TWSAWHFGGG ADDTPQVIGV AITLAAVVAL 181 MGGVMLAAGG GRRAGARGIG YLAAGITLGV TLALVAALVV YVKSYDSAEM DEEFLFESTV 241 GPGFWLLVCM AVLAAITLPI LLLAHRRAIG MPRPGRAADG VTGVLLLLAA ALTITGSLLD 301 LLEKSNAWGF TGEDESALTW QGPVLTLTAT LSIAMAFALF SRLPVKFRQV RGLAVFVSGL 361 AVGAPLAVVC DTESVNLSLA DLLTESLGPG FWVLTVATVT AWAAAISSLA AQRELEIPAT 421 TWPPAAGQPY YPAPQQYPAH PAPQTYAAPP QTPPAPPQLV QEEPWQQTAG PEA //