LOCUS       QLY33767.1               473 aa    PRT              BCT 27-JUL-2020
DEFINITION  Nocardia huaxiensis hypothetical protein protein.
ACCESSION   CP059399-3430
PROTEIN_ID  QLY33767.1
SOURCE      Nocardia huaxiensis
  ORGANISM  Nocardia huaxiensis
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 8339910)
  AUTHORS   Zhuang,K. and Ran,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2020) Dermatovenereology, West China Hospital,
            Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan
            610041, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: FALCON v. AUGUST-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 07/22/2020 23:23:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.12
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 7,641
            CDSs (total)                      :: 7,551
            Genes (coding)                    :: 7,450
            CDSs (with protein)               :: 7,450
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 23 of 101
            Pseudo Genes (incomplete)         :: 76 of 101
            Pseudo Genes (internal stop)      :: 7 of 101
            Pseudo Genes (multiple problems)  :: 5 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nocardia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="WCH-YHL-001"
                     /isolation_source="skin sample from patient"
                     /host="Homo sapiens"
                     /type_material="type strain of Nocardia huaxiensis"
                     /db_xref="taxon:2755382"
                     /country="China: Chengdu"
                     /collection_date="2013"
                     /collected_by="Kaiwen Zhuang"
     protein         /locus_tag="H0264_17390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /transl_table=11
BEGIN
        1 MSEMEGPGTY PHPYEPLRPA DGPRPGPAPG PYPGGSYQPG PPYPPGPAAA PGSTGGNSFP
       61 GGPAPSGTPG AGYSPGGINP GPPSHPGMPG LPAGQVAPIG QGTPGNSPGS AALGRLAGAL
      121 LLSIAALGVP ASFLPLVEFD EAFLDIQMSL TWSAWHFGGG ADDTPQVIGV AITLAAVVAL
      181 MGGVMLAAGG GRRAGARGIG YLAAGITLGV TLALVAALVV YVKSYDSAEM DEEFLFESTV
      241 GPGFWLLVCM AVLAAITLPI LLLAHRRAIG MPRPGRAADG VTGVLLLLAA ALTITGSLLD
      301 LLEKSNAWGF TGEDESALTW QGPVLTLTAT LSIAMAFALF SRLPVKFRQV RGLAVFVSGL
      361 AVGAPLAVVC DTESVNLSLA DLLTESLGPG FWVLTVATVT AWAAAISSLA AQRELEIPAT
      421 TWPPAAGQPY YPAPQQYPAH PAPQTYAAPP QTPPAPPQLV QEEPWQQTAG PEA
//