LOCUS QLY33052.1 400 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis hypothetical protein protein. ACCESSION CP059399-2599 PROTEIN_ID QLY33052.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_13170" /inference="COORDINATES: protein motif:HMM:NF015541.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSRRMIRSMI AAVAIAAGLT SMPQGHADPG TPPLPGQDPF YTQPESLRGA RMGQIVDSRP 61 ITLTGVSTQA PVTAWQVKYV SQDTKGKSWT TMATVIRPSG QTGAPKLVSF QPWIDALDTR 121 CNPSYQLRAG VPYLASTGMI AENGNLATFL DHGFTVVVPD YLGPENQFAA GYVEGRNTLD 181 GIRAALNFEP AGLDGANTPV ALFGYSGGAR GTEFAAELAA DYAPELRIVG SAAGGLPADM 241 GKSAEIMNGG PFGGINFSSA YGLARAYPEL NIPAMFTDPG LEPALSGMCQ TQILASYPFT 301 PMQSKTVDGM WPLGEPEVAA VLDTLKAGRY GTPNAPVYLF MADHDQIAVT ERARDLVADY 361 RGRGVDITYV EYPGTEHVTA ESAGSPAAIA WVADRLNAAN //